RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ZNF23P17027 643 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 FPR1P21462 350 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 SPCS3P61009 180 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 CSNK2A1P68400 391 aaPredicted RBP10.38□□□□□ -0.75
HPS4-212ENST00000481910 GALK2Q01415 458 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 GK3PQ14409 553 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 OR7A5Q15622 319 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 PRICKLE2Q7Z3G6 844 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 TMEM179BQ7Z7N9 219 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 FAM26EQ8N5C1 309 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 OR4D10Q8NGI6 311 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 OR10D3Q8NH80 312 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 OR2V1Q8NHB1 315 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 MIB2Q96AX9 1013 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 BPIFA2Q96DR5 249 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 ADGRG7Q96K78 797 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 PRDM14Q9GZV8 571 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 KRCC1Q9NPI7 259 aaPredicted RBP10.38□□□□□ -0.75
HPS4-212ENST00000481910 PNPLA3Q9NST1 481 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 TRAPPC4Q9Y296 219 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 SHANK1Q9Y566 2161 aa10.38□□□□□ -0.75
HPS4-212ENST00000481910 KMT2BQ9UMN6 2715 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 LRRN3E7EW58 273 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 CXCL13O43927 109 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PMS2P2O95744 297 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 CBLP22681 906 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 IFNGR2P38484 337 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 OR2B6P58173 313 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PRKCDQ05655 676 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 RBPJQ06330 500 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 SOWAHCQ53LP3 525 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 PYHIN1Q6K0P9 492 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZNF585AQ6P3V2 769 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 FJX1Q86VR8 437 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 LINC00471Q8N535 108 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ST6GALNAC3Q8NDV1 305 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 SLC24A4Q8NFF2 622 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 OR5K1Q8NHB7 308 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 MFSD8Q8NHS3 518 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PIGXQ8TBF5 258 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 FAM216AQ8WUB2 273 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PTDSS2Q9BVG9 487 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 COQ10BQ9H8M1 238 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 UFSP2Q9NUQ7 469 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PDP1Q9P0J1 537 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 MRPS7Q9Y2R9 242 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 CEPT1Q9Y6K0 416 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 LIPT2A6NK58 231 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 G3V2T6 193 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PRRG2O14669 202 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 SLC19A2O60779 497 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 TMEM127O75204 238 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 MT-ATP6P00846 226 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 INHBBP09529 407 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 SAGP10523 405 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 FUT1P19526 365 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PRKACGP22612 351 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 GTF2E2P29084 291 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 CTBP2P56545 445 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 RAC3P60763 192 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 RPP30P78346 268 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 SLC35A1P78382 337 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 FLI1Q01543 452 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 LTBQ06643 244 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 PMS2P3Q13401 168 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZNF74Q16587 644 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 MEX3DQ86XN8 651 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZDHHC13Q8IUH4 622 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 HS3ST5Q8IZT8 346 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZNF843Q8N446 348 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 LRRC17Q8N6Y2 441 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 NAXEQ8NCW5 288 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 OR10G2Q8NGC3 310 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 OR9Q2Q8NGE9 314 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 FAM57AQ8TBR7 257 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 NRG4Q8WWG1 115 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 GTF3AQ92664 365 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 SGTBQ96EQ0 304 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 FAM46AQ96IP4 442 aaKnown RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZNF845Q96IR2 970 aaPredicted RBP10.37□□□□□ -0.75
HPS4-212ENST00000481910 C12orf57Q99622 126 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZNF696Q9H7X3 374 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 NANSQ9NR45 359 aa10.37□□□□□ -0.75
HPS4-212ENST00000481910 ZFYVE26Q68DK2 2539 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 SAC3D1A6NKF1 404 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 AHRRA9YTQ3 701 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 FTCDNL1E5RQL4 147 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 IGF2P01344 180 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 GASTP01350 101 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 BGLAPP02818 100 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 HIST1H2ABP04908 130 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 MAKP20794 623 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 GPR4P46093 362 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 OMPP47874 163 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 TPTEP56180 551 aa10.36□□□□□ -0.75
HPS4-212ENST00000481910 TLE1Q04724 770 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms