RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 TMEM179BQ7Z7N9 219 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 HRNRQ86YZ3 2850 aaPredicted RBP17.85■□□□□ 0.45
CTSA-206ENST00000480961 CLDN22Q8N7P3 220 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 GNPDA2Q8TDQ7 276 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 BCL2L2Q92843 193 aaPredicted RBP17.85■□□□□ 0.45
CTSA-206ENST00000480961 MUCL1Q96DR8 90 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 HS3ST6Q96QI5 342 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 POLDIP3Q9BY77 421 aaKnown RBP17.85■□□□□ 0.45
CTSA-206ENST00000480961 B3GAT2Q9NPZ5 323 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 SLC17A5Q9NRA2 495 aa17.85■□□□□ 0.45
CTSA-206ENST00000480961 ALPK2Q86TB3 2170 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 FAM221AA4D161 298 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 RPL36A-HNRNPH2H7BZ11 118 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 IGHG1P01857 330 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 PGA4P0DJD7 388 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 PGA3P0DJD8 388 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 ACADSP16219 412 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 FPR3P25089 353 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 ACVR1BP36896 505 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 PRPS1P60891 318 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 RPL27P61353 136 aaKnown RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 TUBA1BP68363 451 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 TUBA4AP68366 448 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 ANKDD1AQ495B1 522 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 ZNF770Q6IQ21 691 aaPredicted RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 C1orf94Q6P1W5 598 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 TUBA1AQ71U36 451 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 AQP11Q8NBQ7 271 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 PAPD5Q8NDF8 572 aaKnown RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 NRGNQ92686 78 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 HDAC2Q92769 488 aaKnown RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 GTPBP3Q969Y2 492 aaKnown RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 CLEC4MQ9H2X3 399 aaPredicted RBP17.84■□□□□ 0.45
CTSA-206ENST00000480961 POFUT2Q9Y2G5 429 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 SLC25A15Q9Y619 301 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 POLQO75417 2590 aa17.84■□□□□ 0.45
CTSA-206ENST00000480961 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.83■□□□□ 0.44
CTSA-206ENST00000480961 A0A1W2PPR1 153 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 NDUFB2O95178 105 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 CD14P08571 375 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 QDPRP09417 244 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 GSSP48637 474 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 ZNF83P51522 516 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 MICAQ29983 383 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 TBRG1Q3YBR2 411 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 SMARCD3Q6STE5 483 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 SEZ6L2Q6UXD5 910 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 P2RY8Q86VZ1 359 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 C1orf162Q8NEQ5 155 aaPredicted RBP17.83■□□□□ 0.44
CTSA-206ENST00000480961 FANK1Q8TC84 345 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 HTRA1Q92743 480 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 PLPPR2Q96GM1 343 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 SAMD8Q96LT4 415 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 Q96M85 177 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 USB1Q9BQ65 265 aaKnown RBP17.83■□□□□ 0.44
CTSA-206ENST00000480961 MRPL13Q9BYD1 178 aaKnown RBP17.83■□□□□ 0.44
CTSA-206ENST00000480961 NELFAQ9H3P2 528 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 YY1AP1Q9H869 796 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 NPAP1Q9NZP6 1156 aa17.83■□□□□ 0.44
CTSA-206ENST00000480961 H7C1C5 153 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 E2F6O75461 281 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 IGHMP01871 453 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 IGFBP1P08833 259 aaPredicted RBP17.82■□□□□ 0.44
CTSA-206ENST00000480961 LOXP28300 417 aaPredicted RBP17.82■□□□□ 0.44
CTSA-206ENST00000480961 LCN6P62502 163 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 FMODQ06828 376 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 TSPAN31Q12999 210 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 BEX5Q5H9J7 111 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 ANKRD16Q6P6B7 361 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 CDC20BQ86Y33 519 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 HS3ST5Q8IZT8 346 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 NOXO1Q8NFA2 376 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 OR10G2Q8NGC3 310 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 ZNF519Q8TB69 540 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 MCHR2Q969V1 340 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 RASD2Q96D21 266 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 OR52D1Q9H346 318 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 EGLN3Q9H6Z9 239 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 GRHPRQ9UBQ7 328 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 DNAJB9Q9UBS3 223 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 IER3IP1Q9Y5U9 82 aa17.82■□□□□ 0.44
CTSA-206ENST00000480961 TEX13CA0A0J9YWL9 993 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 DPRXA6NFQ7 191 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 NPIPB13A6NJU9 1138 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 ZNF99A8MXY4 864 aaPredicted RBP17.81■□□□□ 0.44
CTSA-206ENST00000480961 NPIPB4C9JG80 1138 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 ARHGEF9O43307 516 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 SLC2A10O95528 541 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 PPP1R3DO95685 299 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 PLAUP00749 431 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 HOXC12P31275 282 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 SH3BGRP55822 239 aaPredicted RBP17.81■□□□□ 0.44
CTSA-206ENST00000480961 CD47Q08722 323 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 KPNB1Q14974 876 aaKnown RBP17.81■□□□□ 0.44
CTSA-206ENST00000480961 HIST3H3Q16695 136 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 RFX4Q33E94 735 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 KLHL24Q6TFL4 600 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 LINC00471Q8N535 108 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 ARIH2OSQ8N7S6 290 aa17.81■□□□□ 0.44
CTSA-206ENST00000480961 GIPC3Q8TF64 312 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms