RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PRRG4Q9BZD6 226 aa14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 TP63Q9H3D4 680 aaPredicted RBP14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 RASSF1Q9NS23 344 aa14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 FOXD3Q9UJU5 478 aaPredicted RBP14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 GPR52Q9Y2T5 361 aa14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 FAM215AQ9Y5M1 114 aa14.95□□□□□ -0.02
SCAMP3-207ENST00000480219 PRR23D1E9PI22 279 aaPredicted RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 PRODHO43272 600 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ARHGEF9O43307 516 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ENTPD6O75354 484 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 SERPINI2O75830 405 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 IGHG1P01857 330 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 CRHP06850 196 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 TPOP07202 933 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 PRR23D2P0DMB1 279 aaPredicted RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ABOP16442 354 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 PAICSP22234 425 aaKnown RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ACVR2AP27037 513 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 TIMP3P35625 211 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC15A1P46059 708 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 RBPJQ06330 500 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 RBM48Q5RL73 367 aaKnown RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 C1orf185Q5T7R7 199 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 NIPAL3Q6P499 406 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 SEM1Q6ZVN7 128 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 DOLPP1Q86YN1 238 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 CPOQ8IVL8 374 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 NOXO1Q8NFA2 376 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 CNIH3Q8TBE1 160 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 TMEM54Q969K7 222 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ZNF582Q96NG8 517 aaPredicted RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 ZFP3Q96NJ6 502 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 TRIB1Q96RU8 372 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 TM9SF2Q99805 663 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 EMC6Q9BV81 110 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 HCAR1Q9BXC0 346 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 MRPS18AQ9NVS2 196 aaKnown RBP14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 CLN6Q9NWW5 311 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 FKBP7Q9Y680 259 aa14.94□□□□□ -0.02
SCAMP3-207ENST00000480219 KALRNO60229 2985 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 SHANK1Q9Y566 2161 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 OR6C65A6NJZ3 312 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 FAM183AA6NL82 134 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 ZNF726A6NNF4 738 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 PRRG2O14669 202 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC19A2O60779 497 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 RENP00797 406 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 NR2C1P13056 603 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 AGTR1P30556 359 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 HTR1FP30939 366 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 STK11Q15831 433 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 EIF2S3LQ2VIR3 472 aaKnown RBP14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC35D3Q5M8T2 416 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 THEM4Q5T1C6 240 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 RIPPLY2Q5TAB7 128 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 ZNF585AQ6P3V2 769 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 PLBD1Q6P4A8 553 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 RPTNQ6XPR3 784 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 C20orf196Q8IYI0 205 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 C9orf106Q8NAJ2 232 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 CYB561A3Q8NBI2 242 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 RFKQ969G6 155 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 LINC00470Q9BZP3 86 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 RACGAP1Q9H0H5 632 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 PARPBPQ9NWS1 579 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 HAO2Q9NYQ3 351 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 AASSQ9UDR5 926 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 MOKQ9UQ07 419 aa14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 KMT2BQ9UMN6 2715 aaPredicted RBP14.93□□□□□ -0.02
SCAMP3-207ENST00000480219 GTF3C1Q12789 2109 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 IGLV1-36A0A0B4J1U3 117 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 CCDC182A6NF36 153 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC1A7O00341 560 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SPI1P17947 270 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 CRABP1P29762 137 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 CEACAM8P31997 349 aaPredicted RBP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 CENPAP49450 140 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SELENOPP49908 381 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 NFATC3Q12968 1075 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 GGTLC2Q14390 218 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SMN1Q16637 294 aaKnown RBP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 C10orf128Q5T292 105 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 LINC01590Q5TEZ4 76 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 PLXDC2Q6UX71 529 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 MEPCEQ7L2J0 689 aaKnown RBP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 TUSC5Q8IXB3 177 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 BBS1Q8NFJ9 593 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 KISS1RQ969F8 398 aaPredicted RBP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SYT4Q9H2B2 425 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 FKBP14Q9NWM8 211 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 DNAJC27Q9NZQ0 273 aa14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 NOSIPQ9Y314 301 aaKnown RBP14.92□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC22A31A6NKX4 558 aa14.91□□□□□ -0.02
SCAMP3-207ENST00000480219 SNTNA6NMZ2 147 aa14.91□□□□□ -0.02
SCAMP3-207ENST00000480219 DCTN6O00399 190 aa14.91□□□□□ -0.02
SCAMP3-207ENST00000480219 SLC43A1O75387 559 aa14.91□□□□□ -0.02
SCAMP3-207ENST00000480219 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
SCAMP3-207ENST00000480219 CRHBPP24387 322 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms