RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 SPRR3Q9UBC9 169 aa10□□□□□ -0.81
APTX-223ENST00000479656 DIMT1Q9UNQ2 313 aaKnown RBP10□□□□□ -0.81
APTX-223ENST00000479656 TP53TG5Q9Y2B4 290 aa10□□□□□ -0.81
APTX-223ENST00000479656 PCDHGB7Q9Y5F8 929 aa10□□□□□ -0.81
APTX-223ENST00000479656 ZNF99A8MXY4 864 aaPredicted RBP10□□□□□ -0.81
APTX-223ENST00000479656 J3QRE1 110 aa10□□□□□ -0.81
APTX-223ENST00000479656 SLC16A7O60669 478 aa10□□□□□ -0.81
APTX-223ENST00000479656 GLCEO94923 617 aa10□□□□□ -0.81
APTX-223ENST00000479656 PTHP01270 115 aa10□□□□□ -0.81
APTX-223ENST00000479656 SBK2P0C263 348 aa10□□□□□ -0.81
APTX-223ENST00000479656 CLDN17P56750 224 aa10□□□□□ -0.81
APTX-223ENST00000479656 CAMK2DQ13557 499 aa10□□□□□ -0.81
APTX-223ENST00000479656 SLC17A1Q14916 467 aa10□□□□□ -0.81
APTX-223ENST00000479656 ETFDHQ16134 617 aa10□□□□□ -0.81
APTX-223ENST00000479656 SLC35D3Q5M8T2 416 aa10□□□□□ -0.81
APTX-223ENST00000479656 LINC01590Q5TEZ4 76 aa10□□□□□ -0.81
APTX-223ENST00000479656 EEF1A1P5Q5VTE0 462 aa10□□□□□ -0.81
APTX-223ENST00000479656 LYPD4Q6UWN0 246 aa10□□□□□ -0.81
APTX-223ENST00000479656 PLXDC2Q6UX71 529 aa10□□□□□ -0.81
APTX-223ENST00000479656 UNQ6494/PRO21346Q6UXR6 183 aa10□□□□□ -0.81
APTX-223ENST00000479656 CREB3L2Q70SY1 520 aa10□□□□□ -0.81
APTX-223ENST00000479656 LHFPL3Q86UP9 236 aa10□□□□□ -0.81
APTX-223ENST00000479656 PROKR2Q8NFJ6 384 aa10□□□□□ -0.81
APTX-223ENST00000479656 OR2T4Q8NH00 348 aa10□□□□□ -0.81
APTX-223ENST00000479656 RORBQ92753 470 aa10□□□□□ -0.81
APTX-223ENST00000479656 MUL1Q969V5 352 aa10□□□□□ -0.81
APTX-223ENST00000479656 CPNE4Q96A23 557 aaPredicted RBP10□□□□□ -0.81
APTX-223ENST00000479656 SNX18Q96RF0 628 aa10□□□□□ -0.81
APTX-223ENST00000479656 KCNK17Q96T54 332 aa10□□□□□ -0.81
APTX-223ENST00000479656 TBX5Q99593 518 aa10□□□□□ -0.81
APTX-223ENST00000479656 ALG12Q9BV10 488 aa10□□□□□ -0.81
APTX-223ENST00000479656 ADGRL4Q9HBW9 690 aa10□□□□□ -0.81
APTX-223ENST00000479656 B9D1Q9UPM9 204 aa10□□□□□ -0.81
APTX-223ENST00000479656 MOKQ9UQ07 419 aa10□□□□□ -0.81
APTX-223ENST00000479656 B3GNT3Q9Y2A9 372 aa10□□□□□ -0.81
APTX-223ENST00000479656 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 LAMA5O15230 3695 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 A0A087WV48 116 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 ZNF726A6NNF4 738 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 NPIPA2E9PIF3 369 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 NPIPA3F8WFD2 350 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 H3BSA7 217 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 GPANK1O95872 356 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 IGHG3P01860 377 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 HCCSP53701 268 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 GP2P55259 537 aaKnown RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 RPS3AP61247 264 aaKnown RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 TBCEQ15813 527 aaPredicted RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 CARD17Q5XLA6 110 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 GPR141Q7Z602 305 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 NANOGP1Q8N7R0 232 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 ZNF511Q8NB15 262 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 OR9K2Q8NGE7 335 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 C9orf43Q8TAL5 461 aaPredicted RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 WDYHV1Q96HA8 205 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 CRELD1Q96HD1 420 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 FOXN4Q96NZ1 517 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 OR5M11Q96RB7 305 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 ZNF71Q9NQZ8 489 aaPredicted RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 CHCHD3Q9NX63 227 aaKnown RBP9.99□□□□□ -0.81
APTX-223ENST00000479656 LUZP4Q9P127 313 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 ERGIC3Q9Y282 383 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 FKBP7Q9Y680 259 aa9.99□□□□□ -0.81
APTX-223ENST00000479656 MED19A0JLT2 244 aaPredicted RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 C12orf71A8MTZ7 269 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 ZNHIT1O43257 154 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 SELENOFO60613 162 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 CTLA4P16410 223 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 MYL12AP19105 171 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 NAA10P41227 235 aaPredicted RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 CENPAP49450 140 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 FMODQ06828 376 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 POU4F3Q15319 338 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 MED22Q15528 200 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 LCN1P1Q5VSP4 162 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 UBE2UQ5VVX9 321 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 FOXB2Q5VYV0 432 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 RNLSQ5VYX0 342 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 FAM205BPQ63HN1 556 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 ZBTB46Q86UZ6 589 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 ZIC4Q8N9L1 334 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 OR6X1Q8NH79 312 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 SLC25A44Q96H78 314 aaPredicted RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 TUBA1CQ9BQE3 449 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 ZNF649Q9BS31 505 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 SF3B5Q9BWJ5 86 aaKnown RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 MRPL13Q9BYD1 178 aaKnown RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 EXOSC1Q9Y3B2 195 aaKnown RBP9.98□□□□□ -0.81
APTX-223ENST00000479656 ALPK2Q86TB3 2170 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 TVP23AA6NH52 213 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 ZNF716A6NP11 495 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 SEC14L2O76054 403 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 IGHA1P01876 353 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 TFP02787 698 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 LIMS3P0CW19 117 aa9.98□□□□□ -0.81
APTX-223ENST00000479656 LIMS4P0CW20 117 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms