RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 IL5RAQ01344 420 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 CAMK2DQ13557 499 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 TAF11Q15544 211 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 ETFDHQ16134 617 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 CARD17Q5XLA6 110 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 NIPAL3Q6P499 406 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 LYPD4Q6UWN0 246 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 CHMP1BQ7LBR1 199 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 CPOQ8IVL8 374 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 C8orf59Q8N0T1 100 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 ZNF843Q8N446 348 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 FAM26EQ8N5C1 309 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 OR9Q1Q8NGQ5 310 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 SLC25A44Q96H78 314 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 SNX18Q96RF0 628 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 TTYH2Q9BSA4 534 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 RHNO1Q9BSD3 238 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 PRRG4Q9BZD6 226 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 TP63Q9H3D4 680 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 DNAJC27Q9NZQ0 273 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 GRHPRQ9UBQ7 328 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 KLHL21Q9UJP4 597 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 PRRG2O14669 202 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 ENTPD6O75354 484 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 GPANK1O95872 356 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 GYPBP06028 91 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 YES1P07947 543 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 PSKH1P11801 424 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 FCGR2AP12318 317 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 CTLA4P16410 223 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 FMO3P31513 532 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 PTGER4P35408 488 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 CA7P43166 264 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 UQCRFS1P47985 274 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 ZNF133P52736 654 aaPredicted RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 SIRPAP78324 504 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 CDK5R2Q13319 367 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 IGFBP7Q16270 282 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 SLC25A30Q5SVS4 291 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 LINC01590Q5TEZ4 76 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 TSPO2Q5TGU0 170 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 PLBD1Q6P4A8 553 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 LRFN4Q6PJG9 635 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 CASP12Q6UXS9 341 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 CXXC5Q7LFL8 322 aaKnown RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 AAED1Q7RTV5 226 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 THAP5Q7Z6K1 395 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 ADCK1Q86TW2 530 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 C20orf196Q8IYI0 205 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 SYT14Q8NB59 555 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 OR8J1Q8NGP2 316 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 INTS12Q96CB8 462 aaKnown RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 ZNF837Q96EG3 531 aaPredicted RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 GMPPAQ96IJ6 420 aaPredicted RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
CHD3-210ENST00000479080 SLC38A2Q96QD8 506 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 ALG12Q9BV10 488 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 NUAK2Q9H093 628 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 SYT4Q9H2B2 425 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 ASB6Q9NWX5 421 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 PRSS50Q9UI38 385 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
CHD3-210ENST00000479080 SVILO95425 2214 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 A6NIZ1 184 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 RIIAD1A6NNX1 92 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 CGAP01215 116 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 SCG5P05408 212 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 STSP08842 583 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 SPI1P17947 270 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 PYCR1P32322 319 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 TIMP3P35625 211 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 SLC25A1P53007 311 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 NUDT6P53370 316 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 RAP1BP61224 184 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 RAP1AP62834 184 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 TLE1Q04724 770 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 OCLNQ16625 522 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 OTPQ5XKR4 325 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 FAM205BPQ63HN1 556 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 SLC25A47Q6Q0C1 308 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 B3GLCTQ6Y288 498 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 B3GNT6Q6ZMB0 384 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 JAZF1Q86VZ6 243 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 OR6V1Q8N148 313 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 DEPDC4Q8N2C3 294 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 TRUB1Q8WWH5 349 aaKnown RBP11.58□□□□□ -0.56
CHD3-210ENST00000479080 SGCDQ92629 289 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 LRR1Q96L50 414 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 ADAD1Q96M93 576 aaKnown RBP11.58□□□□□ -0.56
CHD3-210ENST00000479080 APOL4Q9BPW4 351 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 NDEL1Q9GZM8 345 aa11.58□□□□□ -0.56
CHD3-210ENST00000479080 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms