RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SMYD1Q8NB12 490 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 HIPK4Q8NE63 616 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 TMEM186Q96B77 213 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 ZNF75AQ96N20 296 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 MCHR1Q99705 422 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 TMEM43Q9BTV4 400 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 RSPO3Q9BXY4 272 aaPredicted RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 TMEM38AQ9H6F2 299 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 HIF1ANQ9NWT6 349 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 ZNF224Q9NZL3 707 aa11.38□□□□□ -0.59
VCL-205ENST00000478896 MYEF2Q9P2K5 600 aaKnown RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 ZNF346Q9UL40 294 aaKnown RBP11.38□□□□□ -0.59
VCL-205ENST00000478896 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 M0R3H8 397 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 PLPP3O14495 311 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 RGS9O75916 674 aaPredicted RBP11.37□□□□□ -0.59
VCL-205ENST00000478896 FARS2O95363 451 aaKnown RBP11.37□□□□□ -0.59
VCL-205ENST00000478896 MSMBP08118 114 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 PATE4P0C8F1 98 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 FAM157BP0CG42 384 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 MRPL19P49406 292 aaKnown RBP11.37□□□□□ -0.59
VCL-205ENST00000478896 SELENOVP59797 346 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 ACTG1P63261 375 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 MELKQ14680 651 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 FXNQ16595 210 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 PAGE3Q5JUK9 113 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 SWT1Q5T5J6 900 aaKnown RBP11.37□□□□□ -0.59
VCL-205ENST00000478896 BLOC1S3Q6QNY0 202 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 THSD4Q6ZMP0 1018 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 PIWIL3Q7Z3Z3 882 aaKnown RBP11.37□□□□□ -0.59
VCL-205ENST00000478896 CARM1Q86X55 608 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 OR51F2Q8NH61 342 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 SNX33Q8WV41 574 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 ZNF566Q969W8 418 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 ZNF416Q9BWM5 594 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 OR51B6Q9H340 312 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 IKZF5Q9H5V7 419 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 RNF121Q9H920 327 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 CDH20Q9HBT6 801 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 GLTPQ9NZD2 209 aa11.37□□□□□ -0.59
VCL-205ENST00000478896 A0A0A6YYJ9 748 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 SLC22A23A1A5C7 686 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 CPSF4LA6NMK7 179 aaKnown RBP11.36□□□□□ -0.59
VCL-205ENST00000478896 KPNA4O00629 521 aaPredicted RBP11.36□□□□□ -0.59
VCL-205ENST00000478896 RNF13O43567 381 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 CHP2O43745 196 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 TPST2O60704 377 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 NCR1O76036 304 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 VENTXO95231 258 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 OPN1SWP03999 348 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 SERPINA5P05154 406 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 OR8G3PP0DMU2 310 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 GAAP10253 952 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 UMPSP11172 480 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 GPX2P18283 190 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 TMEM33P57088 247 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 RBBP4Q09028 425 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 ZNF613Q6PF04 617 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 TTC33Q6PID6 262 aaPredicted RBP11.36□□□□□ -0.59
VCL-205ENST00000478896 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 FUNDC1Q8IVP5 155 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 SKA3Q8IX90 412 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 SLC22A24Q8N4F4 322 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 ICA1LQ8NDH6 482 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 SLC30A7Q8NEW0 376 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 OR6X1Q8NH79 312 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 YIPF5Q969M3 257 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 EBF4Q9BQW3 602 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 WFDC6Q9BQY6 131 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 ZNF385DQ9H6B1 395 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 NANSQ9NR45 359 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 TREM2Q9NZC2 230 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 TAAR3PQ9P1P4 343 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 GPR160Q9UJ42 338 aa11.36□□□□□ -0.59
VCL-205ENST00000478896 WNT9BO14905 357 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TPD52L2O43399 206 aaKnown RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 CDC14BO60729 498 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 MFN2O95140 757 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TGDSO95455 350 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 CH25HO95992 272 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 LCKP06239 509 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 VIMP08670 466 aaKnown RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 CCL2P13500 99 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 MAGEB1P43366 347 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 KLF3P57682 345 aaPredicted RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 MRPS11P82912 194 aaKnown RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 ZNF74Q16587 644 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 CYP51A1Q16850 503 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TBC1D28Q2M2D7 210 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 AGKQ53H12 422 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 ENTPD8Q5MY95 495 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 TMEM53Q6P2H8 277 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 FAHD2BQ6P2I3 314 aaPredicted RBP11.35□□□□□ -0.59
VCL-205ENST00000478896 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
VCL-205ENST00000478896 DEF8Q6ZN54 512 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms