RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 FUSP35637 526 aaKnown RBP eCLIP0.49□□□□□ -2.33
HPS3-205ENST00000478525 DDOSTP39656 456 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 SLC15A2Q16348 729 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 ARMC3Q5W041 872 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 FAM71F2Q6NXP2 309 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 CNIH2Q6PI25 160 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 ANKRD23Q86SG2 305 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 ACOT4Q8N9L9 421 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 NOXO1Q8NFA2 376 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 IPMKQ8NFU5 416 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 HGDQ93099 445 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 FLYWCH2Q96CP2 140 aaKnown RBP0.49□□□□□ -2.33
HPS3-205ENST00000478525 XPO4Q9C0E2 1151 aaKnown RBP0.49□□□□□ -2.33
HPS3-205ENST00000478525 PARP12Q9H0J9 701 aaKnown RBP0.49□□□□□ -2.33
HPS3-205ENST00000478525 GBA3Q9H227 469 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 NEK6Q9HC98 313 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 GNG12Q9UBI6 72 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 HOOK1Q9UJC3 728 aaKnown RBP0.49□□□□□ -2.33
HPS3-205ENST00000478525 VWDEQ8N2E2 1590 aa0.49□□□□□ -2.33
HPS3-205ENST00000478525 RPAP1Q9BWH6 1393 aaPredicted RBP0.48□□□□□ -2.33
HPS3-205ENST00000478525 TRAV6A0A075B6T7 132 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 SLC9B1P1A6NJY1 282 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 CLDN5O00501 218 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 PFKFB2O60825 505 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 LRATO95237 230 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 PSMA2P25787 234 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 CCR8P51685 355 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 FAM53BQ14153 422 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 MESDQ14696 234 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 C2orf76Q3KRA6 126 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 PCOTHQ58A44 107 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 PHYHD1Q5SRE7 291 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 TMEM205Q6UW68 189 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 ZSCAN30Q86W11 494 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 KRT35Q92764 455 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 SGK3Q96BR1 496 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 CCDC43Q96MW1 224 aaKnown RBP0.48□□□□□ -2.33
HPS3-205ENST00000478525 ZNF681Q96N22 645 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 RAB17Q9H0T7 212 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 PARP11Q9NR21 331 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 ARGLU1Q9NWB6 273 aaPredicted RBP0.48□□□□□ -2.33
HPS3-205ENST00000478525 THUMPD1Q9NXG2 353 aaKnown RBP0.48□□□□□ -2.33
HPS3-205ENST00000478525 GIN1Q9NXP7 522 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 N6AMT1Q9Y5N5 214 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 NACADO15069 1562 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 NOTCH1P46531 2555 aa0.48□□□□□ -2.33
HPS3-205ENST00000478525 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
HPS3-205ENST00000478525 UBE4BO95155 1302 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 A0A1W2PNV4 684 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 C5orf63A6NC05 138 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 TCP1P17987 556 aaKnown RBP0.47□□□□□ -2.33
HPS3-205ENST00000478525 MAP3K8P41279 467 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 TDO2P48775 406 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 PLA2G16P53816 162 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 VGLL4Q14135 290 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 PRPSAP1Q14558 356 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 SNRNP35Q16560 246 aaKnown RBP0.47□□□□□ -2.33
HPS3-205ENST00000478525 ADNP2Q6IQ32 1131 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 GUSBP11Q6P575 273 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 LRRC8BQ6P9F7 803 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 FBXL13Q8NEE6 735 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 SDR42E1Q8WUS8 393 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 SHC3Q92529 594 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 TMEM186Q96B77 213 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 REEP4Q9H6H4 257 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 PALMDQ9NP74 551 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 SLC17A5Q9NRA2 495 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 UVRAGQ9P2Y5 699 aa0.47□□□□□ -2.33
HPS3-205ENST00000478525 CENPVL3A0A0U1RRI6 287 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 SYCE3A1L190 88 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 BTNL10A8MVZ5 291 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 NPIPA7E9PJI5 369 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 HLA-DQB1P01920 261 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 NPIPA8P0DM63 369 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 CCDC192P0DO97 292 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 IL1RNP18510 177 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 ADRA1AP35348 466 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 CDKN2BP42772 138 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 SSR1P43307 286 aaKnown RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 ACTN3Q08043 901 aaPredicted RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 NCBP1Q09161 790 aaKnown RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 STUMQ69YW2 141 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 OR2A2Q6IF42 318 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 DNAJC24Q6P3W2 148 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 C16orf47Q6ZP98 133 aaPredicted RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 USP50Q70EL3 339 aaPredicted RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 ABHD13Q7L211 337 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 CCDC91Q7Z6B0 441 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 ACOT1Q86TX2 421 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 CLEC4FQ8N1N0 589 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 NKAIN3Q8N8D7 197 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 FNDC5Q8NAU1 212 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 OR4S2Q8NH73 311 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 TBL1YQ9BQ87 522 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 TUBGCP2Q9BSJ2 902 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 SAV1Q9H4B6 383 aaPredicted RBP0.46□□□□□ -2.34
HPS3-205ENST00000478525 ZNF337Q9Y3M9 751 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 IKBKGQ9Y6K9 419 aa0.46□□□□□ -2.34
HPS3-205ENST00000478525 LAMB2P55268 1798 aa0.45□□□□□ -2.34
HPS3-205ENST00000478525 THADAQ6YHU6 1953 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms