RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 MBTPS2O43462 519 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 ENPP1P22413 925 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 HTR2CP28335 458 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 APOBEC1P41238 236 aaKnown RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 SEC61A1P61619 476 aaKnown RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 PLCXD3Q63HM9 321 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 C3P1Q6ZMU1 363 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 CPEB2Q7Z5Q1 589 aaKnown RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 KMT5CQ86Y97 462 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 PRR18Q8N4B5 295 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 OR51D1Q8NGF3 324 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 PRRT1Q99946 306 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 NIPAL2Q9H841 368 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 CALHM2Q9HA72 323 aa13.02□□□□□ -0.33
NPHP4-208ENST00000478423 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.33
NPHP4-208ENST00000478423 CNOT4O95628 575 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF44P15621 663 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 BDKRB2P30411 391 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 RPS27P42677 84 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 HCCSP53701 268 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 PSPHP78330 225 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 GABREP78334 506 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 GALEQ14376 348 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 AGERQ15109 404 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 VN1R4Q7Z5H5 301 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 MORN4Q8NDC4 146 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 BBS1Q8NFJ9 593 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ENY2Q9NPA8 101 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 KLHL13Q9P2N7 655 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 TMEFF2Q9UIK5 374 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 A3GALT2U3KPV4 340 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 GPR171O14626 319 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 GPX5O75715 221 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 OR7C1O76099 320 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 MTCP1P56278 107 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 YIF1BQ5BJH7 314 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 DEDD2Q8WXF8 326 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ZG16BQ96DA0 208 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 PAPOLGQ9BWT3 736 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 RBFOX1Q9NWB1 397 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 UBL3O95164 117 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 SPI1P17947 270 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ATF4P18848 351 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 GDNFP39905 211 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ATP1B3P54709 279 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 RPL18Q07020 188 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 MLC1Q15049 377 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF813Q6ZN06 617 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 BPIFB2Q8N4F0 458 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ARIH2OSQ8N7S6 290 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 PHYHIPQ92561 330 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 SLAMF7Q9NQ25 335 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ACOXLQ9NUZ1 547 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 SIRT5Q9NXA8 310 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 WNT16Q9UBV4 365 aa13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
NPHP4-208ENST00000478423 ARRDC5A6NEK1 342 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 MAGEB4O15481 346 aaPredicted RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 IRF2P14316 349 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 GPR3P46089 330 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 TAS2R19P59542 299 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 IL13RA1P78552 427 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 TEKQ02763 1124 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 FCRL6Q6DN72 434 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 MOB3CQ70IA8 216 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 KIAA0907Q7Z7F0 614 aaPredicted RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 NOXA1Q86UR1 476 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SGPP2Q8IWX5 399 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 CADM4Q8NFZ8 388 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 OR9K2Q8NGE7 335 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 LAT2Q9GZY6 243 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 TTLL8A6PVC2 850 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SDHAP31040 664 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 MEF2DQ14814 521 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 PPA1Q15181 289 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 HLA-BQ31612 363 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 GLB1L2Q8IW92 636 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 OR6F1Q8NGZ6 308 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 GPBAR1Q8TDU6 330 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 TMEM59Q9BXS4 323 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 POU2F2P09086 479 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 VEGFCP49767 419 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 PNLIPRP2P54317 469 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 DLX5P56178 289 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 YRDCQ86U90 279 aaKnown RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 LACC1Q8IV20 430 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 ZNF709Q8N972 641 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 OR4C3Q8NH37 302 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 FGGYQ96C11 551 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
NPHP4-208ENST00000478423 TWSG1Q9GZX9 223 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 SPEF1Q9Y4P9 236 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 IGHV5-51A0A0C4DH38 117 aa13□□□□□ -0.33
NPHP4-208ENST00000478423 TBX19O60806 448 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms