RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PCGF2P35227 344 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 GLRXP35754 106 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 GIPRP48546 466 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 BIDP55957 195 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 RAB1AP62820 205 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 SCGB2A2Q13296 93 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 DLEU7Q6UYE1 221 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC35D2Q76EJ3 337 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 MYPOPQ86VE0 399 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 COMTD1Q86VU5 262 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 C10orf111Q8N326 155 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 LRMDAQ9H2I8 198 aa12.48□□□□□ -0.41
SMARCE1-209ENST00000478349 A0A1W2PPW3 197 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 C11orf98E9PRG8 122 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 M0QX08 132 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 MGRN1O60291 552 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 IFNA14P01570 189 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 IGHG1P01857 330 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 OPN1SWP03999 348 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ADRA2AP08913 450 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF14P17017 642 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 MTPNP58546 118 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 PIGFQ07326 219 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ZP4Q12836 540 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 CYLC2Q14093 348 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 NPTX1Q15818 432 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF74Q16587 644 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC36A2Q495M3 483 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 NRN1LQ496H8 165 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ENTPD8Q5MY95 495 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 PTOV1Q86YD1 416 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 CDK20Q8IZL9 346 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 OR6T1Q8NGN1 323 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 POLR2J2Q9GZM3 115 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 POLR2J3Q9H1A7 115 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 REV1Q9UBZ9 1251 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 BAG5Q9UL15 447 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC7A7Q9UM01 511 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 DNHD1Q96M86 4753 aa12.47□□□□□ -0.41
SMARCE1-209ENST00000478349 A0A1W2PRG6 482 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 GMNCA6NCL1 334 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 CH25HO95992 272 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 BCL10O95999 233 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 MT-ND5P03915 603 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 SERPINA5P05154 406 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF35P13682 527 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 IFNA8P32881 189 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 SRP14P37108 136 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 DAP3P51398 398 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF84P51523 738 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 MRPS11P82912 194 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 PLP2Q04941 152 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 MOGQ16653 247 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 DUSP7Q16829 419 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 MMEL1Q495T6 779 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 PHYHD1Q5SRE7 291 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 UNQ6126/PRO20091Q6UXV3 157 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 HDXQ7Z353 690 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC22A24Q8N4F4 322 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 OR1J2Q8NGS2 313 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 SNX33Q8WV41 574 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 PCDHAC1Q9H158 963 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 KCNN2Q9H2S1 579 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 TPK1Q9H3S4 243 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 ZNF385DQ9H6B1 395 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 KAT8Q9H7Z6 458 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 CDH20Q9HBT6 801 aa12.46□□□□□ -0.41
SMARCE1-209ENST00000478349 FBN1P35555 2871 aaKnown RBP12.46□□□□□ -0.42
SMARCE1-209ENST00000478349 A0A0G2JND7 137 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 CENPBD1B2RD01 187 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 DHHO43323 396 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 TPST2O60704 377 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 ACHEP22303 614 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 RBM34P42696 430 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 CLRN1P58418 232 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 MAPRE2Q15555 327 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 NKPD1Q17RQ9 610 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 VMACQ2NL98 169 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 CR1LQ2VPA4 569 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 TTMPQ5BVD1 217 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 ERICH5Q6P6B1 374 aa12.45□□□□□ -0.42
SMARCE1-209ENST00000478349 TEX29Q8N6K0 151 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms