RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CSNK1A1P48729 337 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 BIDP55957 195 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 ERVS71-1P61550 626 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 GUCA2AQ02747 115 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 LRRC74AQ0VAA2 488 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 BAMBIQ13145 260 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 MAPK11Q15759 364 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 FXNQ16595 210 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 TBC1D28Q2M2D7 210 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 PCGF3Q3KNV8 242 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 TMEM53Q6P2H8 277 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 C5orf46Q6UWT4 87 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 RETREG3Q86VR2 466 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 WDFY1Q8IWB7 410 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SKA3Q8IX90 412 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 C20orf196Q8IYI0 205 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SCAIQ8N9R8 606 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC38A5Q8WUX1 472 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 C11orf40Q8WZ69 217 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 CCL17Q92583 94 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 GTF3AQ92664 365 aaKnown RBP5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 ZBTB9Q96C00 473 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 TXNDC15Q96J42 360 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 EPYCQ99645 322 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SH3GL3Q99963 347 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF696Q9H7X3 374 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC6A13Q9NSD5 602 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 AIG1Q9NVV5 245 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC13A4Q9UKG4 626 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 FBXL3Q9UKT7 428 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 CACNG2Q9Y698 323 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 DSPPQ9NZW4 1301 aa5.7□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A087WUJ7 227 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 IQCMA0A1B0GVH7 501 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 A0A1B0GWA3 101 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PLSCR5A0PG75 271 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 LRRN3E7EW58 273 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 MS4A18H0YCH9 400 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SPRY3O43610 288 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 DEAF1O75398 565 aaPredicted RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 FARS2O95363 451 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ALDOCP09972 364 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ADORA3P0DMS8 318 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 KITP10721 976 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 BGNP21810 368 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 IL12AP29459 219 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PCGF2P35227 344 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 CRYBB2P43320 205 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF81P51508 661 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 RGS8P57771 180 aaPredicted RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 MRPS11P82912 194 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PLP2Q04941 152 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PUDPQ08623 228 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 MELKQ14680 651 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 MS4A18Q3C1V0 323 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 GTDC1Q4AE62 458 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PDCD4Q53EL6 469 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SPATA46Q5T0L3 261 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 LRRC18Q8N456 261 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC22A24Q8N4F4 322 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PAQR4Q8N4S7 273 aaPredicted RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 RBM15BQ8NDT2 890 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 OR1J1Q8NGS3 322 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 FGFBP3Q8TAT2 258 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 TAF15Q92804 592 aaKnown RBP eCLIP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 MAL2Q969L2 176 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC25A28Q96A46 364 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ELMOD3Q96FG2 381 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC47A1Q96FL8 570 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ITCHQ96J02 903 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 DCLRE1CQ96SD1 692 aaKnown RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 LRMDAQ9H2I8 198 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 CENPHQ9H3R5 247 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 DENND2DQ9H6A0 471 aaPredicted RBP5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 RMND5AQ9H871 391 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 TPT1P8Q9HAU6 139 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 PNPOQ9NVS9 261 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 SLCO1C1Q9NYB5 712 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF224Q9NZL3 707 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 KLHL14Q9P2G3 628 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 CHST2Q9Y4C5 530 aa5.69□□□□□ -1.5
RTFDC1-206ENST00000477485 DOCK11Q5JSL3 2073 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 IGKV1D-42A0A075B6H8 117 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 IGHV3OR16-10A0A075B7F0 116 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 KPNA4O00629 521 aaPredicted RBP5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 RNF13O43567 381 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 ZNF500O60304 480 aaPredicted RBP5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 ENTPD5O75356 428 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 SLC22A3O75751 556 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 GPANK1O95872 356 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 SERPINA5P05154 406 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 IL6P05231 212 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 UMPSP11172 480 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 MAKP20794 623 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 OMGP23515 440 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 GATA3P23771 443 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 PRTN3P24158 256 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 HTR2AP28223 471 aa5.68□□□□□ -1.5
RTFDC1-206ENST00000477485 EPHA3P29320 983 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms