RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SKP1P63208 163 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ACY1Q03154 408 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 RELAQ04206 551 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ZNF33BQ06732 778 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SCN1BQ07699 218 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 NDUFA9Q16795 377 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 DEFB110Q30KQ9 67 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ATP6AP1LQ52LC2 224 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 CLEC6AQ6EIG7 209 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TRIM40Q6P9F5 258 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SCIMPQ6UWF3 145 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 C3P1Q6ZMU1 363 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TMEM182Q6ZP80 229 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 ABHD13Q7L211 337 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PAGE2Q7Z2X7 111 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ZER1Q7Z7L7 766 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ASPGQ86U10 573 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PAQR7Q86WK9 346 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 POM121L12Q8N7R1 296 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 MFSD9Q8NBP5 474 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 OR7G3Q8NG95 312 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 FLVCR1-AS1Q8TAF5 88 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TWIST2Q8WVJ9 160 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SLC13A3Q8WWT9 602 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 CORO2AQ92828 525 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 RIT1Q92963 219 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ST6GALNAC6Q969X2 333 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TUBGCP3Q96CW5 907 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 FAM122AQ96E09 287 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 C19orf60Q96EN9 201 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 WDR34Q96EX3 536 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 CMTM7Q96FZ5 175 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PPP1R36Q96LQ0 422 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PPP3R2Q96LZ3 170 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 RILPQ96NA2 401 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 AGAP4Q96P64 663 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 KCNA7Q96RP8 456 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SORT1Q99523 831 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SERPINI1Q99574 410 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 ROGDIQ9GZN7 287 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 SPNS1Q9H2V7 528 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 COPS7BQ9H9Q2 264 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 SLCO1B3Q9NPD5 702 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 TMEM9Q9P0T7 183 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 BTRCQ9Y297 605 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 USH1CQ9Y6N9 552 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 AP1M2Q9Y6Q5 423 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 PTPRZ1P23471 2315 aaPredicted RBP3.22□□□□□ -1.89
UBR3-209ENST00000477461 SCN3AQ9NY46 2000 aa3.22□□□□□ -1.89
UBR3-209ENST00000477461 KNTC1P50748 2209 aa3.21□□□□□ -1.89
UBR3-209ENST00000477461 KCNE1BA0A087WTH5 132 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 TRAV34A0A0B4J273 112 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 IGKV1-8A0A0C4DH67 115 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 GOLGA8QA0A0J9YX86 632 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ATP6AP2A0A1C7CYW4 349 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 GNG14A0A1W2PPG7 69 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 GOLGA8OA6NCC3 632 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 GOLGA8NF8WBI6 632 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 H0YGG7 62 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 K7EQD1 137 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FOXE1O00358 373 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 NDUFAB1O14561 156 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 POLR1CO15160 346 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 ERI3O43414 337 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 BCL2L11O43521 198 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 LCMT2O60294 686 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 PEX11AO75192 247 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CSO75390 466 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 SEC22BO75396 215 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SAP30O75446 220 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SEMA3DO95025 777 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 STATHP02808 62 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 HBQ1P09105 142 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SPTBP11277 2137 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 LBPP18428 481 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 NCF2P19878 526 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 SSR2P43308 183 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 AQP5P55064 265 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FOXA1P55317 472 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 STX1BP61266 288 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 RPL38P63173 70 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 CBX1P83916 185 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZFP36L1Q07352 338 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 CD300CQ08708 224 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 EIF3IQ13347 325 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 ABRAXAS2Q15018 415 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZIC1Q15915 447 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 DUSP5Q16690 384 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ISXQ2M1V0 245 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 SPIN4Q56A73 249 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 TOR1AIP1Q5JTV8 583 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 TCHHL1Q5QJ38 904 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 ATP1A1-AS1Q5TC04 95 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 HES3Q5TGS1 186 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 KHDRBS2Q5VWX1 349 aaKnown RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 CES4AQ5XG92 561 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 FRMPD2BQ6IN97 320 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 ZNF770Q6IQ21 691 aaPredicted RBP3.21□□□□□ -1.9
UBR3-209ENST00000477461 NIPAL1Q6NVV3 410 aa3.21□□□□□ -1.9
UBR3-209ENST00000477461 CHMP1BQ7LBR1 199 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms