RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PTP4A1Q93096 173 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 DDIT4LQ96D03 193 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GIMAP5Q96F15 307 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ATF6BQ99941 703 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CST11Q9H112 138 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 B3GAT2Q9NPZ5 323 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CTSFQ9UBX1 484 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 KCNG2Q9UJ96 466 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 RNF215Q9Y6U7 377 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CACNA1HO95180 2353 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 OR14I1A6ND48 311 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SEMA7AO75326 666 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SFTPBP07988 381 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ENDOUP21128 410 aaKnown RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 CEBPGP53567 150 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 BIDP55957 195 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 PSG6Q00889 435 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SMCO1Q147U7 214 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 LANCL3Q6ZV70 420 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 GABRG3Q99928 467 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 WDR76Q9H967 626 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 KLK11Q9UBX7 282 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 PLEKHB1Q9UF11 243 aaPredicted RBP10.07□□□□□ -0.8
COL27A1-204ENST00000477421 SRPK3Q9UPE1 567 aa10.07□□□□□ -0.8
COL27A1-204ENST00000477421 ROS1P08922 2347 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 OR6C68A6NDL8 312 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 F5H0A9 414 aaPredicted RBP10.06□□□□□ -0.8
COL27A1-204ENST00000477421 P2RY10O00398 339 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 DVL2O14641 736 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 SEMG1P04279 462 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 IFNGR1P15260 489 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 FCARP24071 287 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 CDK5R1Q15078 307 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 ELAVL1Q15717 326 aaKnown RBP10.06□□□□□ -0.8
COL27A1-204ENST00000477421 NKAIN1Q4KMZ8 207 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 FAM69AQ5T7M9 428 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 C1orf140Q5VVS0 124 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 SLC6A15Q9H2J7 730 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 CES1P1Q9UKY3 287 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 NPFFR2Q9Y5X5 522 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 PATJQ8NI35 1801 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 A0A0B4J2E0 115 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 A0A1B0GX12 115 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 TRIM64A6NGJ6 449 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 DISC1C4P0D8 188 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 RFPL3O75679 317 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 NKX2-2O95096 273 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 HRGP04196 525 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 GABRB1P18505 474 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 COL28A1Q2UY09 1125 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM201Q5SNT2 666 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 C9orf135Q5VTT2 229 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 C1QL3Q5VWW1 255 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 DGAT2L6Q6ZPD8 337 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 LRRC18Q8N456 261 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF615Q8N8J6 731 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 TEX19Q8NA77 164 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 LILRB4Q8NHJ6 448 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 PELI1Q96FA3 418 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 MEPEQ9NQ76 525 aaPredicted RBP10.06□□□□□ -0.8
COL27A1-204ENST00000477421 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 TRAV36DV7A0A075B6V5 113 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 ZNF736B4DX44 427 aaPredicted RBP10.06□□□□□ -0.8
COL27A1-204ENST00000477421 M0QYG6 137 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 WDPCPO95876 746 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 PPICP45877 212 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 PLGLB1Q02325 96 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 CDC20Q12834 499 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 CCINQ13939 588 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 METTL11BQ5VVY1 283 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 BAIAP2L2Q6UXY1 529 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 OR14L1PQ8NHC6 308 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 MOGAT1Q96PD6 335 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 SNX18Q96RF0 628 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 ERVMER34-1Q9H9K5 563 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 HPF1Q9NWY4 346 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 UBQLN2Q9UHD9 624 aa10.06□□□□□ -0.8
COL27A1-204ENST00000477421 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 A0A1B0GX78 115 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 NUPL2O15504 423 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 CRTAPO75718 401 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 TBX6O95947 436 aaPredicted RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 KNG1P01042 644 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 TMEM225BP0DP42 221 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ATF1P18846 271 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ANXA7P20073 488 aaKnown RBP10.05□□□□□ -0.8
COL27A1-204ENST00000477421 ARPC4P59998 168 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 TMPRSS11FQ6ZWK6 438 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 DCXRQ7Z4W1 244 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 CMTM4Q8IZR5 234 aa10.05□□□□□ -0.8
COL27A1-204ENST00000477421 OR56B4Q8NH76 319 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms