RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 GK3PQ14409 553 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 SLC36A3Q495N2 470 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 SLC35F1Q5T1Q4 408 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 CD300LDQ6UXZ3 194 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 DPY19L2P2Q6ZN68 376 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 BHLHA15Q7RTS1 189 aaPredicted RBP13.96□□□□□ -0.17
COPS3-207ENST00000477299 IQCF1Q8N6M8 205 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ARIH2OSQ8N7S6 290 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ATG16L2Q8NAA4 619 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ACBD4Q8NC06 268 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 OR6N1Q8NGY5 312 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 NMD3Q96D46 503 aaKnown RBP13.96□□□□□ -0.17
COPS3-207ENST00000477299 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
COPS3-207ENST00000477299 ERMAPQ96PL5 475 aaPredicted RBP13.96□□□□□ -0.17
COPS3-207ENST00000477299 GPX7Q96SL4 187 aaPredicted RBP13.96□□□□□ -0.17
COPS3-207ENST00000477299 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 IFT27Q9BW83 186 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 TSSK6Q9BXA6 273 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 LINC00470Q9BZP3 86 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 CRLF2Q9HC73 371 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ASB6Q9NWX5 421 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 IL20Q9NYY1 176 aa13.96□□□□□ -0.17
COPS3-207ENST00000477299 ADGRG4Q8IZF6 3080 aa13.96□□□□□ -0.18
COPS3-207ENST00000477299 HEATR1Q9H583 2144 aaKnown RBP13.96□□□□□ -0.18
COPS3-207ENST00000477299 NBPF19A0A087WUL8 3843 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 C16orf97H3BN30 126 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 BHLHE40O14503 412 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 SOCS2O14508 198 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 ARHGEF9O43307 516 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 KRT33AO76009 404 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 SLC2A10O95528 541 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 THBDP07204 575 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 ANXA8P13928 327 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 COX5AP20674 150 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 EPHA2P29317 976 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 CDKN2AP42771 156 aaKnown RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 CSNK1A1P48729 337 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 ARF1P84077 181 aaKnown RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 ITGADQ13349 1161 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 GABRA6Q16445 453 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 HIST3H3Q16695 136 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 CEACAM16Q2WEN9 425 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 TMEM236Q5W0B7 351 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 MEX3BQ6ZN04 569 aaKnown RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 HIPK1Q86Z02 1210 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 PQLC1Q8N2U9 271 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 GPR137CQ8N3F9 429 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 POMGNT2Q8NAT1 580 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 OR4K13Q8NH42 304 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 MAGEE2Q8TD90 523 aaPredicted RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 ZNF566Q969W8 418 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 S100PBPQ96BU1 408 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 ZC3HAV1LQ96H79 300 aaKnown RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 ADAD1Q96M93 576 aaKnown RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 ZNF570Q96NI8 536 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 SLC29A1Q99808 456 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 CIB1Q99828 191 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 NELFAQ9H3P2 528 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 GLTPQ9NZD2 209 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 GRHPRQ9UBQ7 328 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 NKX1-2Q9UD57 310 aaPredicted RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 TMEFF2Q9UIK5 374 aaPredicted RBP13.95□□□□□ -0.18
COPS3-207ENST00000477299 HECTD1Q9ULT8 2610 aa13.95□□□□□ -0.18
COPS3-207ENST00000477299 MAST4O15021 2626 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 RTTNQ86VV8 2226 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 A0A096LPE4 126 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 A0A1W2PPZ6 126 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 NPIPB13A6NJU9 1138 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 NPIPB4C9JG80 1138 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 AKAP8O43823 692 aaKnown RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 QDPRP09417 244 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 HIST1H1CP16403 213 aaKnown RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 GSTM3P21266 225 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 POU1F1P28069 291 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 SLC6A6P31641 620 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 POLR2IP36954 125 aaKnown RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 DAP3P51398 398 aaKnown RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 ARHGDIAP52565 204 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 CLRN1P58418 232 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 P2RY6Q15077 328 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 RCN1Q15293 331 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ETFDHQ16134 617 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 HIKESHIQ53FT3 197 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ZNF362Q5T0B9 420 aaPredicted RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 OTPQ5XKR4 325 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 KDM4DQ6B0I6 523 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ALKBH2Q6NS38 261 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ACSM5Q6NUN0 579 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ZDHHC13Q8IUH4 622 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 DMRTC2Q8IXT2 367 aaPredicted RBP13.94□□□□□ -0.18
COPS3-207ENST00000477299 NOXO1Q8NFA2 376 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 STMN2Q93045 179 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 MCHR2Q969V1 340 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 LRR1Q96L50 414 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 FOXN4Q96NZ1 517 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 TSSK2Q96PF2 358 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 ACTR6Q9GZN1 396 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
COPS3-207ENST00000477299 TBC1D23Q9NUY8 699 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms