RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 LAMP3Q9UQV4 416 aa11.89□□□□□ -0.51
RAB5A-208ENST00000476544 HIF3AQ9Y2N7 669 aa11.89□□□□□ -0.51
RAB5A-208ENST00000476544 V9GYQ6 96 aa11.89□□□□□ -0.51
RAB5A-208ENST00000476544 TCRBV5S2A0A599 114 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 HTR3EA5X5Y0 456 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 NDUFS7O75251 213 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 IGKV3-15P01624 115 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 HLA-HP01893 362 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 H1F0P07305 194 aaKnown RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 QDPRP09417 244 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 PATE4P0C8F1 98 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 CALCRP30988 508 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 OMPP47874 163 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF133P52736 654 aaPredicted RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 FXYD6P3P58550 94 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 NKX6-1P78426 367 aaPredicted RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 HGFACQ04756 655 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 SPATS1Q496A3 300 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 NANOGNBQ7Z5D8 188 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 SKA3Q8IX90 412 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 CLDN22Q8N7P3 220 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 OR6N1Q8NGY5 312 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 BCAS4Q8TDM0 211 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 MCHR2Q969V1 340 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF347Q96SE7 839 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 CCL19Q99731 98 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF346Q9UL40 294 aaKnown RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 MOKQ9UQ07 419 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 MAGED1Q9Y5V3 778 aaPredicted RBP11.88□□□□□ -0.51
RAB5A-208ENST00000476544 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
RAB5A-208ENST00000476544 TRAV27A0A087WT01 109 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ACOT8O14734 319 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 DHHO43323 396 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 CECR9P0C854 216 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ACADSP16219 412 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 CALB2P22676 271 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 LIMS1P48059 325 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 MNAT1P51948 309 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
RAB5A-208ENST00000476544 MYBPC1Q00872 1141 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 C11orf71Q6IPW1 123 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 KLHL17Q6TDP4 642 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 KLHL24Q6TFL4 600 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 CYP2R1Q6VVX0 501 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF730Q6ZMV8 503 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ZER1Q7Z7L7 766 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 DTX2Q86UW9 622 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 MDP1Q86V88 176 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 IGFN1Q86VF2 1251 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 LRRC75A-AS1Q8N1F1 130 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 SYT14Q8NB59 555 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 OR52J3Q8NH60 311 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 SLC7A6OSQ96CW6 309 aaPredicted RBP11.87□□□□□ -0.51
RAB5A-208ENST00000476544 RADILQ96JH8 1075 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ADAD1Q96M93 576 aaKnown RBP11.87□□□□□ -0.51
RAB5A-208ENST00000476544 NSMCE2Q96MF7 247 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 SLC38A2Q96QD8 506 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 TRAF4Q9BUZ4 470 aaPredicted RBP11.87□□□□□ -0.51
RAB5A-208ENST00000476544 GSX2Q9BZM3 304 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 TXNIPQ9H3M7 391 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ANKRD19PQ9H560 264 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 IL1RAPQ9NPH3 570 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 ACTR3BQ9P1U1 418 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 MAGEL2Q9UJ55 1249 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 SAMD4AQ9UPU9 718 aaKnown RBP11.87□□□□□ -0.51
RAB5A-208ENST00000476544 MGAT4BQ9UQ53 548 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 UGT2A1Q9Y4X1 527 aa11.87□□□□□ -0.51
RAB5A-208ENST00000476544 EFCAB9A8MZ26 197 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 SMPD2O60906 423 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 PDE5AO76074 875 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 UBOX5O94941 541 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 WNT11O96014 354 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 TTKP33981 857 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 GPR4P46093 362 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 PTH2RP49190 550 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 HMGA2P52926 109 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 NAAAQ02083 359 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 PIGFQ07326 219 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
RAB5A-208ENST00000476544 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 C3orf36Q3SXR2 165 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 ALG10Q5BKT4 473 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 PGM2L1Q6PCE3 622 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 SLC25A47Q6Q0C1 308 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 SLC22A25Q6T423 547 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF813Q6ZN06 617 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 TRPM8Q7Z2W7 1104 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 PIWIL3Q7Z3Z3 882 aaKnown RBP11.86□□□□□ -0.51
RAB5A-208ENST00000476544 OAFQ86UD1 273 aa11.86□□□□□ -0.51
RAB5A-208ENST00000476544 CIARTQ8N365 385 aaPredicted RBP11.86□□□□□ -0.51
RAB5A-208ENST00000476544 ZNF519Q8TB69 540 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms