RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.51
PSMB4-204ENST00000476467 OSTF1Q92882 214 aa11.83□□□□□ -0.51
PSMB4-204ENST00000476467 ZNF582Q96NG8 517 aaPredicted RBP11.83□□□□□ -0.51
PSMB4-204ENST00000476467 ZNF587Q96SQ5 575 aaPredicted RBP11.83□□□□□ -0.51
PSMB4-204ENST00000476467 SRXN1Q9BYN0 137 aa11.83□□□□□ -0.51
PSMB4-204ENST00000476467 TIGARQ9NQ88 270 aa11.83□□□□□ -0.51
PSMB4-204ENST00000476467 MRPL39Q9NYK5 338 aaKnown RBP11.83□□□□□ -0.51
PSMB4-204ENST00000476467 DAPK2Q9UIK4 370 aa11.83□□□□□ -0.51
PSMB4-204ENST00000476467 PRRC2CQ9Y520 2896 aaKnown RBP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 FUOMA2VDF0 154 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 EIF1BO60739 113 aaKnown RBP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 PTGS2P35354 604 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 PPP5CP53041 499 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 RPS4XP62701 263 aaKnown RBP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 SPHARQ15513 63 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 SGCBQ16585 318 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 TRIM16LQ309B1 348 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 ADPRHL1Q8NDY3 354 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 PROKR2Q8NFJ6 384 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 OR52I1Q8NGK6 324 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 TEX47Q8TBZ9 253 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 CPT1CQ8TCG5 803 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 CPNE4Q96A23 557 aaPredicted RBP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 LRR1Q96L50 414 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 MND1Q9BWT6 205 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 CHST11Q9NPF2 352 aa11.83□□□□□ -0.52
PSMB4-204ENST00000476467 DIMT1Q9UNQ2 313 aaKnown RBP11.83□□□□□ -0.52
PSMB4-204ENST00000476467 SVILO95425 2214 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 TRAV27A0A087WT01 109 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 GPX5O75715 221 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 EDN3P14138 238 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 CD40LGP29965 261 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 BCAP31P51572 246 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 AGFG1P52594 562 aaKnown RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 SNAPC1Q16533 368 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 ZNF239Q16600 458 aaKnown RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 SLC27A4Q6P1M0 643 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 ZNF620Q6ZNG0 422 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 H1FNTQ75WM6 255 aaPredicted RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 CLDN22Q8N7P3 220 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 TMEM163Q8TC26 289 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 FANK1Q8TC84 345 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 MRPS18AQ9NVS2 196 aaKnown RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 SIGLEC7Q9Y286 467 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 B3GALT5Q9Y2C3 310 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 HIF3AQ9Y2N7 669 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 CDH10Q9Y6N8 788 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 AQP7P3A6NL99 342 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 AKR7A3O95154 331 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 RAB36O95755 333 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 TSPAN19P0C672 248 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 ENPP1P22413 925 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 UQCRC1P31930 480 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 FHL1Q13642 323 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 RPL13AP3Q6NVV1 102 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 CHMP1BQ7LBR1 199 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 MINDY2Q8NBR6 621 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 OR51A7Q8NH64 312 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 ZNF845Q96IR2 970 aaPredicted RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 NDEL1Q9GZM8 345 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 C6orf62Q9GZU0 229 aaPredicted RBP11.82□□□□□ -0.52
PSMB4-204ENST00000476467 MCCC2Q9HCC0 563 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 SEC14L4Q9UDX3 406 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 IGSF10Q6WRI0 2623 aa11.82□□□□□ -0.52
PSMB4-204ENST00000476467 PLPP3O14495 311 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 SMAD9O15198 467 aaKnown RBP11.81□□□□□ -0.52
PSMB4-204ENST00000476467 ZNHIT1O43257 154 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 PTP4A3O75365 173 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 RCBTB2O95199 551 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 SYNGR4O95473 234 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 ABOP16442 354 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 P2RY4P51582 365 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 H3F3AP84243 136 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 GXYLT1Q4G148 440 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 SMARCD3Q6STE5 483 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 FAM57AQ8TBR7 257 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 ZPLD1Q8TCW7 415 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 TNFRSF13CQ96RJ3 184 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 MCTS1Q9ULC4 181 aaKnown RBP11.81□□□□□ -0.52
PSMB4-204ENST00000476467 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
PSMB4-204ENST00000476467 A0A1W2PNV4 684 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 PRODHO43272 600 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 NDUFB2O95178 105 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 FXYD6P3P58550 94 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 PRPS1P60891 318 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 RBPJQ06330 500 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 RPL18Q07020 188 aaKnown RBP11.8□□□□□ -0.52
PSMB4-204ENST00000476467 ZP4Q12836 540 aa11.8□□□□□ -0.52
PSMB4-204ENST00000476467 MLLT11Q13015 90 aaPredicted RBP11.8□□□□□ -0.52
PSMB4-204ENST00000476467 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms