RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 SLC7A8Q9UHI5 535 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 POFUT2Q9Y2G5 429 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 SPEF1Q9Y4P9 236 aa11.24□□□□□ -0.61
MRPL55-228ENST00000476267 TENM1Q9UKZ4 2725 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 POLR3GO15318 223 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 CHP2O43745 196 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 VENTXO95231 258 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 RAB36O95755 333 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 SERPINA5P05154 406 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 PATE4P0C8F1 98 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 TCN1P20061 433 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 SLC6A2P23975 617 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 AQP1P29972 269 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 GPR6P46095 362 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 CSNK1A1P48729 337 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 BIDP55957 195 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 STX1BP61266 288 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 LMO4P61968 165 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 RPS23P62266 143 aaKnown RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZP4Q12836 540 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF74Q16587 644 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 DUSP7Q16829 419 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF613Q6PF04 617 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 LRFN4Q6PJG9 635 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 GLCCI1Q86VQ1 547 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 RANBP3LQ86VV4 465 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ARMC8Q8IUR7 673 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 HIPK4Q8NE63 616 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 GPR32P1Q8NGA4 272 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 OR4D11Q8NGI4 311 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 OR6N1Q8NGY5 312 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 OR6X1Q8NH79 312 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF607Q96SK3 696 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 CCDC28BQ9BUN5 200 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 SLCO1B3Q9NPD5 702 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF275Q9NSD4 429 aaPredicted RBP11.23□□□□□ -0.61
MRPL55-228ENST00000476267 FBXL3Q9UKT7 428 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 FZR1Q9UM11 496 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 CORO2BQ9UQ03 480 aa11.23□□□□□ -0.61
MRPL55-228ENST00000476267 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 M0R3H8 397 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SERPINB7O75635 380 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 TFP02787 698 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 MSMBP08118 114 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 PGA4P0DJD7 388 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 PGA3P0DJD8 388 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 ADORA3P0DMS8 318 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 GAAP10253 952 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
MRPL55-228ENST00000476267 NAT2P11245 290 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 PCMT1P22061 227 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 AHCYP23526 432 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SRP14P37108 136 aaKnown RBP11.22□□□□□ -0.61
MRPL55-228ENST00000476267 ATP4BP51164 291 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM33P57088 247 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 HIST3H3Q16695 136 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 RUNDC3AQ59EK9 446 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SNX32Q86XE0 403 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SLC22A24Q8N4F4 322 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SMYD1Q8NB12 490 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 OR6T1Q8NGN1 323 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 ZFAND2BQ8WV99 257 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM186Q96B77 213 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 MCHR1Q99705 422 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 TMEM38BQ9NVV0 291 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 HIF1ANQ9NWT6 349 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 GLTPQ9NZD2 209 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 SELENONQ9NZV5 590 aa11.22□□□□□ -0.61
MRPL55-228ENST00000476267 C11orf98E9PRG8 122 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 SERPINI2O75830 405 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 SNAP29O95721 258 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 CLPTM1O96005 669 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 ZNF250P15622 560 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 MAGEB1P43366 347 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 CRYBA2P53672 197 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 GALK2Q01415 458 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 SELPLGQ14242 412 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 ENTPD8Q5MY95 495 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-228ENST00000476267 REP15Q6BDI9 236 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 C1orf229Q6ZS94 237 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-228ENST00000476267 RBM45Q8IUH3 476 aaKnown RBP11.21□□□□□ -0.61
MRPL55-228ENST00000476267 LRRC17Q8N6Y2 441 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 SLC25A44Q96H78 314 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-228ENST00000476267 TSPAN32Q96QS1 320 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 SEPHS2Q99611 448 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 PCDHAC1Q9H158 963 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 NARFLQ9H6Q4 476 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 G6PC2Q9NQR9 355 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
MRPL55-228ENST00000476267 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms