RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PRPHP41219 470 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CSNK1DP48730 415 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PLD1Q13393 1074 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PDK3Q15120 406 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PDZK1Q5T2W1 519 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PMF1Q6P1K2 205 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF620Q6ZNG0 422 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PAQR7Q86WK9 346 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 TTC5Q8N0Z6 440 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 Q8N9L7 120 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 OR52M1Q8NGK5 317 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 NDRG1Q92597 394 aaKnown RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CXorf40BQ96DE9 158 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 COQ2Q96H96 371 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 FCRL1Q96LA6 429 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CFAP53Q96M91 514 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 RPRD1AQ96P16 312 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 OR2M2Q96R28 347 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CHRDL1Q9BU40 450 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 YY1AP1Q9H869 796 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 GORASP2Q9H8Y8 452 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 POLE4Q9NR33 117 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 KCNIP1Q9NZI2 227 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 BFARQ9NZS9 450 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 NUFIP1Q9UHK0 495 aaKnown RBP3.19□□□□□ -1.9
PTCD3-211ENST00000476215 CDH9Q9ULB4 789 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 ARHGAP21Q5T5U3 1957 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 TUBGCP6Q96RT7 1819 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 PKD1L3Q7Z443 1732 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 TOGARAM1Q9Y4F4 1720 aa3.19□□□□□ -1.9
PTCD3-211ENST00000476215 UBR3Q6ZT12 1888 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 C5P01031 1676 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 TRAV26-1A0A087WT03 109 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 A0A0G2JLM5 398 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 RBMY1BA6NDE4 496 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 RBMY1EA6NEQ0 496 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 FAM166BA8MTA8 275 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 RBMY1DP0C7P1 496 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF853P0CG23 659 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 RBMY1A1P0DJD3 496 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 GLRA2P23416 452 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 IL12AP29459 219 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 CCT3P49368 545 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 KLHL38Q2WGJ6 581 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ANKDD1AQ495B1 522 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 GPR157Q5UAW9 335 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 CTRB2Q6GPI1 263 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF429Q86V71 674 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 TMEM61Q8N0U2 210 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ACOT4Q8N9L9 421 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ITCHQ96J02 903 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 OXGR1Q96P68 337 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 NPAS2Q99743 824 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 TMEM43Q9BTV4 400 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 CAPS2Q9BXY5 557 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 SIAEQ9HAT2 523 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 EML4Q9HC35 981 aaKnown RBP3.18□□□□□ -1.9
PTCD3-211ENST00000476215 QPCTLQ9NXS2 382 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 SCN2AQ99250 2005 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 TAF1LQ8IZX4 1826 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 ANKRD26Q9UPS8 1709 aa3.18□□□□□ -1.9
PTCD3-211ENST00000476215 PXDNLA1KZ92 1463 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 ADCY9O60503 1353 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 CEMIPQ8WUJ3 1361 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 NACAE9PAV3 2078 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 GPR89AB7ZAQ6 455 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 ZNF208O43345 1280 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 GPR89BP0CG08 455 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 DUSP3P51452 185 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-211ENST00000476215 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-211ENST00000476215 NCBP1Q09161 790 aaKnown RBP3.17□□□□□ -1.9
PTCD3-211ENST00000476215 Q6P435 159 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 COX15Q7KZN9 410 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 OR5D13Q8NGL4 314 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 FAM104AQ969W3 186 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 TM4SF19Q96DZ7 209 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 COPS8Q99627 209 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 PARD6BQ9BYG5 372 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 VCX2Q9H322 139 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 TP53TG5Q9Y2B4 290 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 SLC25A15Q9Y619 301 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 C10orf71Q711Q0 1435 aa3.17□□□□□ -1.9
PTCD3-211ENST00000476215 A0A0G2JN53 185 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 HSD17B6O14756 317 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 CPLX1O14810 134 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 SPAG6O75602 509 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 PCCAP05165 728 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 CRISP2P16562 243 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 CMA1P23946 247 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 BTCP35070 178 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 MAGEA8P43361 318 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 HNMTP50135 292 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 LHX2P50458 406 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 GBX2P52951 348 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 ATP1B3P54709 279 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 LRRC23Q53EV4 343 aaPredicted RBP3.16□□□□□ -1.9
PTCD3-211ENST00000476215 AGBL2Q5U5Z8 902 aa3.16□□□□□ -1.9
PTCD3-211ENST00000476215 PPP1R42Q7Z4L9 355 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms