RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CSF2RBP32927 897 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 ATP6V1E1P36543 226 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 EMDP50402 254 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 CCR6P51684 374 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 AP3S2P59780 193 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 SRP54P61011 504 aaKnown RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 POU6F2P78424 691 aaPredicted RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC3A1Q07837 685 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 FOXD4Q12950 439 aaPredicted RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 KRT33BQ14525 404 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 OPCMLQ14982 345 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 ULK3Q6PHR2 472 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 TFAP2EQ6VUC0 442 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 PRSS42Q7Z5A4 293 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 ZAR1Q86SH2 424 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 LYPD6Q86Y78 171 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC35F2Q8IXU6 374 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC35F3Q8IY50 421 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 DND1Q8IYX4 353 aaKnown RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 OR4N4Q8N0Y3 316 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 CA13Q8N1Q1 262 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 CAMKVQ8NCB2 501 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 GALNT11Q8NCW6 608 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 OR4E2Q8NGC2 313 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 OR13C5Q8NGS8 318 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 OR52I2Q8NH67 350 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 LGALS14Q8TCE9 139 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 MCHR2Q969V1 340 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 ORAI1Q96D31 301 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 CNN2Q99439 309 aaKnown RBP6.23□□□□□ -1.41
UBR4-212ENST00000475973 MNTQ99583 582 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 IFT27Q9BW83 186 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 GSDMCQ9BYG8 508 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC17A9Q9BYT1 436 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 FGF22Q9HCT0 170 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 EQTNQ9NQ60 294 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC17A5Q9NRA2 495 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 KLHL9Q9P2J3 617 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 MTFP1Q9UDX5 166 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 TBC1D29Q9UFV1 150 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 OR5V1Q9UGF6 321 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 UBQLN2Q9UHD9 624 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 CYB5R1Q9UHQ9 305 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 MOKQ9UQ07 419 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 KCNK6Q9Y257 313 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 RAXQ9Y2V3 346 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SLC6A5Q9Y345 797 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 MAB21L2Q9Y586 359 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 HS3ST3A1Q9Y663 406 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 SDK1Q7Z5N4 2213 aa6.23□□□□□ -1.41
UBR4-212ENST00000475973 TRAV27A0A087WT01 109 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 A0A1W2PPL8 197 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 A0A1W2PRG6 482 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 FAM221AA4D161 298 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 BLACEA4D250 179 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 OR4C45A6NMZ5 311 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 ACOT7O00154 380 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 RRP8O43159 456 aaKnown RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 SIGLEC6O43699 453 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 B3GALT2O43825 422 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 AQP8O94778 261 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 GLSO94925 669 aaPredicted RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 HIST1H2ABP04908 130 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 IFNA16P05015 189 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 GP1BAP07359 652 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 NMBP08949 121 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 SLC35G6P0C7Q6 338 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 GABRA1P14867 456 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 NME1P15531 152 aaKnown RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 CTRB1P17538 263 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 HLA-GP17693 338 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 SPI1P17947 270 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 ZNF10P21506 573 aaPredicted RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 ZP3P21754 424 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 MPZP25189 248 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 TLX1P31314 330 aaPredicted RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 ACVR1BP36896 505 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 P2RX1P51575 399 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 GPR143P51810 404 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 BLVRAP53004 296 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 PSMD4P55036 377 aaKnown RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 UBE2IP63279 158 aaKnown RBP6.22□□□□□ -1.41
UBR4-212ENST00000475973 LGALS3BPQ08380 585 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 MADCAM1Q13477 382 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 GPR68Q15743 365 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.22□□□□□ -1.41
UBR4-212ENST00000475973 KLHL12Q53G59 568 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 EMC4Q5J8M3 183 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 TCTE1Q5JU00 501 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 CTRB2Q6GPI1 263 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 FIGLAQ6QHK4 219 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 Q6ZSR6 202 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 HIST3H2AQ7L7L0 130 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 SLC16A9Q7RTY1 509 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 PRSS45Q7RTY3 260 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 ZNF550Q7Z398 422 aa6.22□□□□□ -1.41
UBR4-212ENST00000475973 KANSL1Q7Z3B3 1105 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms