RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PCNX1Q96RV3 2341 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 NUP210LQ5VU65 1888 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 PCSK5Q92824 1860 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TRAV27A0A087WT01 109 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TRGV5A0A0B4J1U4 118 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 A0A1B0GVC2 190 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 SMIM31A0A1B0GVY4 71 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 OR14I1A6ND48 311 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 AQP7P3A6NL99 342 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 AHRRA9YTQ3 701 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MCIDASD6RGH6 385 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 NPIPA5E9PKD4 350 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MS4A18H0YCH9 400 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 SLC1A7O00341 560 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 EFNA2O43921 213 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 GMFGO60234 142 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 PIP5K1CO60331 668 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 SYNGR4O95473 234 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 CLIC3O95833 236 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 IGHG3P01860 377 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 COX6B1P14854 86 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MYL12AP19105 171 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 FUT4P22083 530 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 AQP2P41181 271 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 DIO1P49895 249 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MEOX1P50221 254 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 GFRA1P56159 465 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ACTC1P68032 377 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ACTA1P68133 377 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 SLC35A2P78381 396 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 HSF2Q03933 536 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 LTBQ06643 244 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 RPL18Q07020 188 aaKnown RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MRPL28Q13084 256 aaKnown RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TUSC1Q2TAM9 212 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MS4A18Q3C1V0 323 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 AADACL4Q5VUY2 407 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TMEM236Q5W0B7 351 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ANKRD34AQ69YU3 496 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 HBMQ6B0K9 141 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MTFR2Q6P444 385 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 POMZP3Q6PJE2 187 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 FAM180AQ6UWF9 173 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TMPRSS11AQ6ZMR5 421 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 UEVLDQ8IX04 471 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 LRRC75AQ8NAA5 344 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 POMGNT2Q8NAT1 580 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 PROKR2Q8NFJ6 384 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 OR52E2Q8NGJ4 325 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 OR13C2Q8NGS9 318 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 OR6X1Q8NH79 312 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 OR2V1Q8NHB1 315 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MOSPD2Q8NHP6 518 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 NEIL3Q8TAT5 605 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 RORBQ92753 470 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 GGHQ92820 318 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 PTP4A1Q93096 173 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ZNF582Q96NG8 517 aaPredicted RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TEAD3Q99594 435 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 WACQ9BTA9 647 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 KATNB1Q9BVA0 655 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ZDHHC11Q9H8X9 412 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 FGF20Q9NP95 211 aaPredicted RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ISYNA1Q9NPH2 558 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 KLHL1Q9NR64 748 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 DEPPQ9NTK1 212 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ITGB1BP2Q9UKP3 347 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 ZNF346Q9UL40 294 aaKnown RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 NPIPA1Q9UND3 350 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 EXOGQ9Y2C4 368 aaKnown RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 EXOSC1Q9Y3B2 195 aaKnown RBP6.28□□□□□ -1.4
SHQ1-207ENST00000475558 TMEM14AQ9Y6G1 99 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 MTORP42345 2549 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 NAV3Q8IVL0 2385 aa6.28□□□□□ -1.4
SHQ1-207ENST00000475558 CELSR1Q9NYQ6 3014 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 PRSS37A4D1T9 235 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 LRRC3CA6NJW4 275 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 NPIPA2E9PIF3 369 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 NPIPA3F8WFD2 350 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 H3BML4 177 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 M0R082 166 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 PHYHO14832 338 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 PRKYO43930 277 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 ENTPD6O75354 484 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 WBP4O75554 376 aaKnown RBP6.27□□□□□ -1.41
SHQ1-207ENST00000475558 GLCEO94923 617 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 PPP1R3DO95685 299 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 CDK1P06493 297 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 TACSTD2P09758 323 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 OR2T7P0C7T2 308 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 IMPDH2P12268 514 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 FCGR2AP12318 317 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 FMO3P31513 532 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 SLC15A1P46059 708 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 ST13P50502 369 aaKnown RBP6.27□□□□□ -1.41
SHQ1-207ENST00000475558 CDH11P55287 796 aa6.27□□□□□ -1.41
SHQ1-207ENST00000475558 B3GALT5-AS1P59052 145 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms