RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NDUFAF1Q9Y375 327 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 NOX1Q9Y5S8 564 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 FKBP7Q9Y680 259 aa6.04□□□□□ -1.44
HDAC3-207ENST00000475549 RTTNQ86VV8 2226 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CHD3Q12873 2000 aaKnown RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CPSF4LA6NMK7 179 aaKnown RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF726A6NNF4 738 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 EVPLLA8MZ36 301 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 C11orf98E9PRG8 122 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CHP2O43745 196 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 MT-ATP6P00846 226 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 HPXP02790 462 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ASAH2BP0C7U1 165 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ADORA3P0DMS8 318 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CCL2P13500 99 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 GLRXP35754 106 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ALDH3B1P43353 468 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 PTDSS1P48651 473 aaKnown RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 RBBP4Q09028 425 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ZP4Q12836 540 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 RAB39AQ14964 217 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 MAD2L1BPQ15013 274 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CR1LQ2VPA4 569 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 RABL3Q5HYI8 236 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 NANOGP8Q6NSW7 305 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 DHDDSQ86SQ9 333 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SLC22A24Q8N4F4 322 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 C11orf65Q8NCR3 313 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ZNF540Q8NDQ6 660 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 BHLHE22Q8NFJ8 381 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 OR6N1Q8NGY5 312 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 OR5J2Q8NH18 312 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 OR10A6Q8NH74 314 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 OR6X1Q8NH79 312 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 VANGL1Q8TAA9 524 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ADAMTS16Q8TE57 1224 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 NEU4Q8WWR8 484 aaPredicted RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 YIPF5Q969M3 257 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SNX18Q96RF0 628 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SEPHS2Q99611 448 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SH3GL3Q99963 347 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SYT3Q9BQG1 590 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ASPNQ9BXN1 380 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 MRPL13Q9BYD1 178 aaKnown RBP6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ULBP2Q9BZM5 246 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 RACGAP1Q9H0H5 632 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 PCDHAC1Q9H158 963 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 NANOGQ9H9S0 305 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 C20orf141Q9NUB4 165 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 TMEM38BQ9NVV0 291 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 GLTPQ9NZD2 209 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 LPAR3Q9UBY5 353 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 REV1Q9UBZ9 1251 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 KCNS2Q9ULS6 477 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 SLC7A7Q9UM01 511 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 FZR1Q9UM11 496 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 CORO2BQ9UQ03 480 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 ANGPT4Q9Y264 503 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 POFUT2Q9Y2G5 429 aa6.03□□□□□ -1.44
HDAC3-207ENST00000475549 IGKV1D-43A0A0B4J1Z2 117 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 FXYD1O00168 92 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 KPNA4O00629 521 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NCR1O76036 304 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 SERPINA5P05154 406 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 QDPRP09417 244 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 TSPAN19P0C672 248 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 PGA4P0DJD7 388 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 PGA3P0DJD8 388 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NAT2P11245 290 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 SRD5A1P18405 259 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 TNFRSF1BP20333 461 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 PCGF2P35227 344 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CSNK1A1P48729 337 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 EVX1P49640 407 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CHN2P52757 468 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CDH15P55291 814 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 ERVS71-1P61550 626 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NCALDP61601 193 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NFYCQ13952 458 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 MELKQ14680 651 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 HIST3H3Q16695 136 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CYP51A1Q16850 503 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM255AQ5JRV8 349 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 SLC35D2Q76EJ3 337 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 PIWIL3Q7Z3Z3 882 aaKnown RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 RANBP3LQ86VV4 465 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CALHM3Q86XJ0 350 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NKAIN4Q8IVV8 208 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 CPEB3Q8NE35 698 aaKnown RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 STON2Q8WXE9 905 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 HPS1Q92902 700 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 MCHR2Q969V1 340 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NMD3Q96D46 503 aaKnown RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 SLC25A44Q96H78 314 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-207ENST00000475549 MAGEB18Q96M61 343 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 TSPAN32Q96QS1 320 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 C19orf24Q9BVV8 132 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 RABEP2Q9H5N1 569 aa6.02□□□□□ -1.45
HDAC3-207ENST00000475549 NANSQ9NR45 359 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms