RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 EPHA2P29317 976 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 GGT2P36268 569 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 UQCRFS1P47985 274 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 CDC42P60953 191 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 ADARB1P78563 741 aaKnown RBP13.42□□□□□ -0.26
MCF2L-224ENST00000475524 ITGADQ13349 1161 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 TOP3AQ13472 1001 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-224ENST00000475524 MESTQ5EB52 335 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 THEM4Q5T1C6 240 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 ACSM5Q6NUN0 579 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 NIPAL3Q6P499 406 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 TFAP2EQ6VUC0 442 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 MRGPRGQ86SM5 289 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 JAZF1Q86VZ6 243 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 C20orf196Q8IYI0 205 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 ZNF100Q8IYN0 542 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 DEPDC4Q8N2C3 294 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 PRR7Q8TB68 274 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 TMEM54Q969K7 222 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 STARD4Q96DR4 205 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 ADI1Q9BV57 179 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 B3GAT2Q9NPZ5 323 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 COQ3Q9NZJ6 369 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 CLEC4AQ9UMR7 237 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 SLC5A6Q9Y289 635 aa13.42□□□□□ -0.26
MCF2L-224ENST00000475524 INTS1Q8N201 2190 aaKnown RBP13.42□□□□□ -0.26
MCF2L-224ENST00000475524 LOC100130705A0A1B0GUX0 176 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 PRSS37A4D1T9 235 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 RPL36A-HNRNPH2H7BZ11 118 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 SURF4O15260 269 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 MPZL2O60487 215 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 RENP00797 406 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 HIST1H1CP16403 213 aaKnown RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CHRNB4P30926 498 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 NTF4P34130 210 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 POLR2IP36954 125 aaKnown RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CAPGP40121 348 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 SELENOPP49908 381 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 AQP4P55087 323 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CLRN1P58418 232 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 EFNB1P98172 346 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 FOXF2Q12947 444 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 MELKQ14680 651 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 SLC25A35Q3KQZ1 300 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 ZIK1Q3SY52 487 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 ZNF362Q5T0B9 420 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 FBXW9Q5XUX1 488 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 NUFIP2Q7Z417 695 aaKnown RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 FJX1Q86VR8 437 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CNEP1R1Q8N9A8 125 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 SETD9Q8NE22 299 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 OR8J1Q8NGP2 316 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 RASD2Q96D21 266 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CCDC120Q96HB5 630 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 PLEKHA8Q96JA3 519 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 EMC6Q9BV81 110 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 ERRFI1Q9UJM3 462 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-224ENST00000475524 PROCRQ9UNN8 238 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 GMPPBQ9Y5P6 360 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 HSPE1-MOB4S4R3N1 261 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 CHD6Q8TD26 2715 aa13.41□□□□□ -0.26
MCF2L-224ENST00000475524 LRRTM2O43300 516 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 ARHGEF9O43307 516 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 PAICSP22234 425 aaKnown RBP13.4□□□□□ -0.26
MCF2L-224ENST00000475524 CRABP1P29762 137 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 CENPAP49450 140 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 SLC25A1P53007 311 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-224ENST00000475524 SIRPAP78324 504 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 CAMK2DQ13557 499 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 SLC25A30Q5SVS4 291 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 C10orf128Q5T292 105 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 C1QTNF12Q5T7M4 302 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 VWA1Q6PCB0 445 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 DNM1P34Q6PK57 102 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 Q6ZT83 130 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 BEND4Q6ZU67 534 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 BTLAQ7Z6A9 289 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 IQCF1Q8N6M8 205 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 NPEPL1Q8NDH3 523 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 OR52E2Q8NGJ4 325 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 TFAP2CQ92754 450 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 RBP7Q96R05 134 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 DDOQ99489 341 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 ZNF184Q99676 751 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-224ENST00000475524 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 IMPAD1Q9NX62 359 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 JKAMPQ9P055 326 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 RAB26Q9ULW5 256 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 RNF6Q9Y252 685 aa13.4□□□□□ -0.26
MCF2L-224ENST00000475524 FKBP7Q9Y680 259 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms