RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 YIF1BQ5BJH7 314 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 C9orf152Q5JTZ5 239 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 OR56B1Q8NGI3 324 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 NRIP3Q9NQ35 241 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 MYOTQ9UBF9 498 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 MGST1P10620 155 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 REEP5Q00765 189 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 RBMS2Q15434 407 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 ZNF74Q16587 644 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 PRTGQ2VWP7 1150 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 ZFPM2Q8WW38 1151 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 CHST8Q9H2A9 424 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 CLEC2DQ9UHP7 191 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 UBBP0CG47 229 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 UBCP0CG48 685 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 CDONQ4KMG0 1287 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 NHSL2Q5HYW2 709 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 Q6ZSR9 355 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 RETREG3Q86VR2 466 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 AMBRA1Q9C0C7 1298 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 DEFB127Q9H1M4 99 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 LUZP4Q9P127 313 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 KIF25Q9UIL4 384 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 PRKNO60260 465 aaPredicted RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 NPPBP16860 134 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 BCKDHBP21953 392 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 PRKACBP22694 351 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 GDNFP39905 211 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 GPLD1P80108 840 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 KHDC1LQ5JSQ8 128 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 MISPQ8IVT2 679 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 EMG1Q92979 244 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 ARSGQ96EG1 525 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 OPA3Q9H6K4 179 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 OIP5O43482 229 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 MFGE8Q08431 387 aaPredicted RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 TBCEQ15813 527 aaPredicted RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 ADPRMQ3LIE5 342 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 ZNF813Q6ZN06 617 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 OR1J2Q8NGS2 313 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 BANF2Q9H503 90 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 F5P12259 2224 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 SULT1C2O00338 296 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 CNIH1O95406 144 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 EIF4EP06730 217 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 NME2P22392 152 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 CST5P28325 142 aaPredicted RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 LGALS4P56470 323 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 TAS2R30P59541 319 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 SHHQ15465 462 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 NRARPQ7Z6K4 114 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 ENTHD1Q8IYW4 607 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 IFI44Q8TCB0 444 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 KIAA1217Q5T5P2 1943 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 RPS10-NUDT3A0A1W2PQS6 291 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 ZC3H12DA2A288 527 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 LRIT2A6NDA9 550 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 RPS10P46783 165 aaKnown RBP10.11□□□□□ -0.79
VAPB-204ENST00000475243 GGTA1PQ4G0N0 100 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 SFXN4Q6P4A7 337 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 NEURL3Q96EH8 262 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 KCNJ15Q99712 375 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 ATP13A2Q9NQ11 1180 aa10.11□□□□□ -0.79
VAPB-204ENST00000475243 PLPP1O14494 284 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 AQP7O14520 342 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 KCNK2O95069 426 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 CRYZL1O95825 349 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 CCR6P51684 374 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 LIM2P55344 173 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 PLK5Q496M5 336 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 VWA2Q5GFL6 755 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 SMIM15Q7Z3B0 74 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 OR6V1Q8N148 313 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 ZNF583Q96ND8 569 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 OR5M11Q96RB7 305 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 SLC19A3Q9BZV2 496 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 MOKQ9UQ07 419 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 TRIM23P36406 574 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 ADPRHP54922 357 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 GNB1P62873 340 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 ALKBH1Q13686 389 aaKnown RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 RBM45Q8IUH3 476 aaKnown RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 GOT1L1Q8NHS2 421 aaPredicted RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 GLTPQ9NZD2 209 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 CGGBP1Q9UFW8 167 aaPredicted RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 COA3Q9Y2R0 106 aaPredicted RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 AKAP11Q9UKA4 1901 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 PRAMEF25A6NGN4 478 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 SLCO2B1O94956 709 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 SRMP19623 302 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 CATR1Q13166 79 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 IL34Q6ZMJ4 242 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 CPNE4Q96A23 557 aaPredicted RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 NTNG1Q9Y2I2 539 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 MDC1Q14676 2089 aaKnown RBP10.1□□□□□ -0.79
VAPB-204ENST00000475243 CBR1P16152 277 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 UBE2KP61086 200 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 DUSP2Q05923 314 aa10.1□□□□□ -0.79
VAPB-204ENST00000475243 BTN1A1Q13410 526 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms