RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 FABP7O15540 132 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 KRT33AO76009 404 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 C4BPAP04003 597 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SOD3P08294 240 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 CYBAP13498 195 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 AGXTP21549 392 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 EEF1B2P24534 225 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 DPP4P27487 766 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 MAGEA6P43360 314 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 RPL21P46778 160 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 MS4A2Q01362 244 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ARHGAP1Q07960 439 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 OR4D1Q15615 310 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 EML3Q32P44 896 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 COX19Q49B96 90 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 LIPKQ5VXJ0 399 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 NUFIP2Q7Z417 695 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 MIER2Q8N344 545 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 TTC9BQ8N6N2 239 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 PXT1Q8NFP0 134 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 OR10AD1Q8NGE0 317 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 OR10X1Q8NGY0 326 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 NETO1Q8TDF5 533 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ASB17Q8WXJ9 295 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SEMA4DQ92854 862 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SENP8Q96LD8 212 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ROPN1BQ9BZX4 212 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ACTR3CQ9C0K3 210 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 PPDPFQ9H3Y8 114 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 PHPT1Q9NRX4 125 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 CNOT2Q9NZN8 540 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SPAARA0A1B0GVQ0 90 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 D6RAR5 112 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ADAM10O14672 748 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ST8SIA3O43173 380 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 OR2T1O43869 369 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 EIF4E2O60573 245 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 YIF1AO95070 293 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ITGBL1O95965 494 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SERPINA1P01009 418 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 IGHG3P01860 377 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 INHAP05111 366 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM253P0C7T8 217 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SMIM10L2AP0DMW4 78 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SMIM10L2BP0DMW5 78 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 RPS3P23396 243 aaKnown RBP eCLIP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 PPT1P50897 306 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 GRB14Q14449 540 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 TNXAQ16473 311 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 IFI44LQ53G44 452 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 CRTC3Q6UUV7 619 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 UPRTQ96BW1 309 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 WDFY2Q96P53 400 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 THTPAQ9BU02 230 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ABCG5Q9H222 651 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SEMA4GQ9NTN9 838 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 SMPD4Q9NXE4 827 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 MRPL15Q9P015 296 aaKnown RBP4.42□□□□□ -1.7
NPHP3-206ENST00000474871 ARMCX1Q9P291 453 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 CDYLQ9Y232 598 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 COQ4Q9Y3A0 265 aa4.42□□□□□ -1.7
NPHP3-206ENST00000474871 LEFTY2O00292 366 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 DUX1O43812 170 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PCDH7O60245 1069 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MED26O95402 600 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PF4P02776 101 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TK1P04183 234 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 COX7A2P14406 83 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CHRNB2P17787 502 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PGFP49763 221 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 VSX2P58304 361 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MVKQ03426 396 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF585BQ52M93 769 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 XKR6Q5GH73 641 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 TIMM23BQ5SRD1 257 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MDS2Q8NDY4 140 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 DUSP18Q8NEJ0 188 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 OR4C6Q8NH72 309 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ARRDC2Q8TBH0 407 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 WNT2BQ93097 391 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 DUX5Q96PT3 197 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 NPAS2Q99743 824 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF436Q9C0F3 470 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CDCP1Q9H5V8 836 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ADGRL4Q9HBW9 690 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 MUTYHQ9UIF7 546 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 ERRFI1Q9UJM3 462 aaPredicted RBP4.41□□□□□ -1.7
NPHP3-206ENST00000474871 PADI3Q9ULW8 664 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1W2PPM1 405 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 SLC16A5O15375 505 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CXCL10P02778 98 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 AKR1C4P17516 323 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 CD72P21854 359 aa4.41□□□□□ -1.7
NPHP3-206ENST00000474871 GNRHRP30968 328 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms