RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 DRD4P21917 467 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 AHCYP23526 432 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 MAGEB1P43366 347 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 COMPP49747 757 aaPredicted RBP11.99□□□□□ -0.49
CCDC78-209ENST00000474647 TMEM33P57088 247 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 MVKQ03426 396 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 FXNQ16595 210 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 PDCD4Q53EL6 469 aaKnown RBP11.99□□□□□ -0.49
CCDC78-209ENST00000474647 AVPI1Q5T686 147 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 NET1Q7Z628 596 aaPredicted RBP11.99□□□□□ -0.49
CCDC78-209ENST00000474647 SNX32Q86XE0 403 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 WDFY1Q8IWB7 410 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ADPRHL1Q8NDY3 354 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 TXNDC15Q96J42 360 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF75AQ96N20 296 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 JMJD8Q96S16 334 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 RBM4Q9BWF3 364 aaKnown RBP11.99□□□□□ -0.49
CCDC78-209ENST00000474647 RACGAP1Q9H0H5 632 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 C12orf10Q9HB07 376 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF224Q9NZL3 707 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 SELENONQ9NZV5 590 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 SLC7A8Q9UHI5 535 aa11.99□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF346Q9UL40 294 aaKnown RBP11.99□□□□□ -0.49
CCDC78-209ENST00000474647 KCNAB3O43448 404 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 MPZL1O95297 269 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 PATE4P0C8F1 98 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 FAM157BP0CG42 384 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 ADRA2CP18825 462 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 IDH3AP50213 366 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 LMO4P61968 165 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 MYBPC1Q00872 1141 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 PUDPQ08623 228 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 RGNQ15493 299 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 RGS7BPQ6MZT1 257 aaPredicted RBP11.98□□□□□ -0.49
CCDC78-209ENST00000474647 TEX29Q8N6K0 151 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 OR9I1Q8NGQ6 314 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 SNX33Q8WV41 574 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 DNAJA4Q8WW22 397 aaPredicted RBP11.98□□□□□ -0.49
CCDC78-209ENST00000474647 SLC35B4Q969S0 331 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 THOC1Q96FV9 657 aaKnown RBP11.98□□□□□ -0.49
CCDC78-209ENST00000474647 LRR1Q96L50 414 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 MOGAT1Q96PD6 335 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 EPYCQ99645 322 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 EBF4Q9BQW3 602 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF385DQ9H6B1 395 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF665Q9H7R5 613 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 BCL2L10Q9HD36 194 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 A4GALTQ9NPC4 353 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 TAAR3PQ9P1P4 343 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 CORINQ9Y5Q5 1042 aa11.98□□□□□ -0.49
CCDC78-209ENST00000474647 LOC102725191A0A1B0GVB3 256 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 LRRN3E7EW58 273 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 C11orf98E9PRG8 122 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 CLIC1O00299 241 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
CCDC78-209ENST00000474647 RP2O75695 350 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 CLPTM1O96005 669 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 AVPP01185 164 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 BGLAPP02818 100 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 ANPEPP15144 967 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 CSNK1A1P48729 337 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 POLR2JP52435 117 aaKnown RBP11.97□□□□□ -0.49
CCDC78-209ENST00000474647 CCL8P80075 99 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TMEM154Q6P9G4 183 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 ULK3Q6PHR2 472 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 C1orf229Q6ZS94 237 aaPredicted RBP11.97□□□□□ -0.49
CCDC78-209ENST00000474647 MSANTD1Q6ZTZ1 278 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 USP43Q70EL4 1123 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF771Q7L3S4 317 aaPredicted RBP11.97□□□□□ -0.49
CCDC78-209ENST00000474647 ZNF627Q7L945 461 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 COMTD1Q86VU5 262 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 SKA3Q8IX90 412 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 LSMEM1Q8N8F7 131 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 SCAIQ8N9R8 606 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 ICA1LQ8NDH6 482 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 NFKBIDQ8NI38 313 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 RAB39BQ96DA2 213 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 SLC47A1Q96FL8 570 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TSPAN32Q96QS1 320 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 OR52B2Q96RD2 323 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 SLC6A7Q99884 636 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 SUCNR1Q9BXA5 334 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TMEM120AQ9BXJ8 343 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 RAD21L1Q9H4I0 556 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TCF7L2Q9NQB0 619 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 FBXL3Q9UKT7 428 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 TGP01266 2768 aa11.97□□□□□ -0.49
CCDC78-209ENST00000474647 A0A0G2JMP0 313 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 A0A0G2JND7 137 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 A0A0X1KG70 313 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 LCKP06239 509 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 CCL2P13500 99 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 LIMS1P48059 325 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 BIDP55957 195 aa11.96□□□□□ -0.49
CCDC78-209ENST00000474647 KLF3P57682 345 aaPredicted RBP11.96□□□□□ -0.49
CCDC78-209ENST00000474647 RGS8P57771 180 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms