RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 EGLN3Q9H6Z9 239 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 COQ10BQ9H8M1 238 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 HEXA-AS1Q9H8Q6 139 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 LIN7BQ9HAP6 207 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SIRT3Q9NTG7 399 aaPredicted RBP4.23□□□□□ -1.73
CCNL1-215ENST00000474539 OCIAD1Q9NX40 245 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 KCMF1Q9P0J7 381 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 COPS3Q9UNS2 423 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 RNF6Q9Y252 685 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 ZNF281Q9Y2X9 895 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 KLK4Q9Y5K2 254 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SBF2Q86WG5 1849 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 NPIPA5A0A0B4J1W7 369 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 XPNPEP2O43895 674 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SFTPBP07988 381 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 BMP2P12643 396 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SNCAP37840 140 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 IKZF1Q13422 519 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 DUSP7Q16829 419 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SYT14P1Q58G82 188 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 YIF1BQ5BJH7 314 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 CCDC144NLQ6NUI1 221 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 DEGS2Q6QHC5 323 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TMEM92Q6UXU6 159 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SHISA6Q6ZSJ9 500 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 MEX3DQ86XN8 651 aaKnown RBP4.23□□□□□ -1.73
CCNL1-215ENST00000474539 LNX2Q8N448 690 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 C17orf78Q8N4C9 275 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 HSD17B8Q92506 261 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 PIGCQ92535 297 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TAAR8Q969N4 342 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 NSUN5Q96P11 429 aaKnown RBP4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SNX18Q96RF0 628 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 CCDC106Q9BWC9 280 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SFXN3Q9BWM7 321 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TXNIPQ9H3M7 391 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TMEM231Q9H6L2 316 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 NMNAT1Q9HAN9 279 aaPredicted RBP4.23□□□□□ -1.73
CCNL1-215ENST00000474539 APMAPQ9HDC9 416 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 ISYNA1Q9NPH2 558 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 SLC7A8Q9UHI5 535 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TUBD1Q9UJT1 453 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 ADAMTS6Q9UKP5 1117 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TRAPPC2LQ9UL33 140 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 OAZ3Q9UMX2 235 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 ALG5Q9Y673 324 aa4.23□□□□□ -1.73
CCNL1-215ENST00000474539 TRAV38-1A0A0B4J264 116 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 A0A1B0GWA3 101 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 TUBAL3A6NHL2 446 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 DHHO43323 396 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 CRTAPO75718 401 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 NGFRP08138 427 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 STSP08842 583 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 ACP2P11117 423 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 LAP3P28838 519 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 PTPN6P29350 595 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 NR4A2P43354 598 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GPR4P46093 362 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 RPS5P46782 204 aaKnown RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 ERFP50548 548 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 RAB7AP51149 207 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 PRKXP51817 358 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 IGFBP7Q16270 282 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 NKG7Q16617 165 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 UGT8Q16880 541 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 METAP1DQ6UB28 335 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GSG1LQ6UXU4 331 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 ZNF574Q6ZN55 896 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 MRGPREQ86SM8 312 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GRPEL2Q8TAA5 225 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 BIRC8Q96P09 236 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 PHB2Q99623 299 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 TREX2Q9BQ50 279 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 RHNO1Q9BSD3 238 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 ZNF471Q9BX82 626 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GPR61Q9BZJ8 451 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 SLC6A17Q9H1V8 727 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 VNN3Q9NY84 501 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 DUSP13Q9UII6 198 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 SSUH2Q9Y2M2 353 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 PLXNB2O15031 1838 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 A0A0A6YYH2 397 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 LINC00854A0A1B0GVQ3 168 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 A6NJ64 397 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 OR2AT4A6NND4 320 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 F6UZH7 168 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 C16orf97H3BN30 126 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 SULT1B1O43704 296 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 TGM6O95932 706 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GUSBP08236 651 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GSTP1P09211 210 aaKnown RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 COL11A2P13942 1736 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 CBLP22681 906 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 MAGEA12P43365 314 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 CX3CR1P49238 355 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 RNF144AP50876 292 aaPredicted RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 GNB2P62879 340 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 UBE2IP63279 158 aaKnown RBP4.22□□□□□ -1.73
CCNL1-215ENST00000474539 TFF2Q03403 129 aa4.22□□□□□ -1.73
CCNL1-215ENST00000474539 FUT7Q11130 342 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms