RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 PM20D2Q8IYS1 436 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 SVOPQ8N4V2 548 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 MEIOBQ8N635 442 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 EXD3Q8N9H8 876 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 OR4F15Q8NGB8 312 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 NEIL3Q8TAT5 605 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 ZMYND19Q96E35 227 aaPredicted RBP9.59□□□□□ -0.87
SP140-208ENST00000473711 ZNF845Q96IR2 970 aaPredicted RBP9.59□□□□□ -0.87
SP140-208ENST00000473711 TSSK2Q96PF2 358 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 EMC6Q9BV81 110 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 NMNAT2Q9BZQ4 307 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 RERGLQ9H628 205 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 ZDHHC11Q9H8X9 412 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 VCX3AQ9NNX9 186 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 FGF20Q9NP95 211 aaPredicted RBP9.59□□□□□ -0.87
SP140-208ENST00000473711 FANCFQ9NPI8 374 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 TIGARQ9NQ88 270 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 TAS2R16Q9NYV7 291 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 TNFRSF10DQ9UBN6 386 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 EXOGQ9Y2C4 368 aaKnown RBP9.59□□□□□ -0.87
SP140-208ENST00000473711 PCDHGB7Q9Y5F8 929 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 NOX1Q9Y5S8 564 aa9.59□□□□□ -0.87
SP140-208ENST00000473711 FREM3P0C091 2139 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 TNRC6AQ8NDV7 1962 aaKnown RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 LOC102725191A0A1B0GVB3 256 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 IRGMA1A4Y4 181 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SLC22A23A1A5C7 686 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 PRSS37A4D1T9 235 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 A6NHS1 94 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 A6NIZ1 184 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SLC22A31A6NKX4 558 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SMAD9O15198 467 aaKnown RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 DNPH1O43598 174 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 TRMUO75648 421 aaKnown RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 WISP2O76076 250 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 RAB36O95755 333 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 ACTL6AO96019 429 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 MRPL3P09001 348 aaKnown RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 ZNF708P17019 499 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 JUNBP17275 347 aaPredicted RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 CLDN17P56750 224 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 RAP1BP61224 184 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 RAP1AP62834 184 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 RAB40BQ12829 278 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 TMED1Q13445 227 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 IRF3Q14653 427 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 PON3Q15166 354 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 BCL2A1Q16548 175 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 C3AR1Q16581 482 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 PLEKHN1Q494U1 663 aaPredicted RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 EEF1A1P5Q5VTE0 462 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 VASNQ6EMK4 673 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 XAF1Q6GPH4 301 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 UNQ6494/PRO21346Q6UXR6 183 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 ADCK1Q86TW2 530 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 OR6V1Q8N148 313 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SYT14Q8NB59 555 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 OR51G2Q8NGK0 314 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 FAR1Q8WVX9 515 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 KISS1RQ969F8 398 aaPredicted RBP9.58□□□□□ -0.88
SP140-208ENST00000473711 SNX18Q96RF0 628 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 TAAR6Q96RI8 345 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 CDCA4Q9BXL8 241 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 NUAK2Q9H093 628 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SYT4Q9H2B2 425 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 ACOT13Q9NPJ3 140 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 SPRR3Q9UBC9 169 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 CLEC2DQ9UHP7 191 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 B9D1Q9UPM9 204 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 TP53TG5Q9Y2B4 290 aa9.58□□□□□ -0.88
SP140-208ENST00000473711 MED12Q93074 2177 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 A0A087WV48 116 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 SLC35F4A4IF30 521 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 NPIPB13A6NJU9 1138 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 ZNF726A6NNF4 738 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 ZNF99A8MXY4 864 aaPredicted RBP9.57□□□□□ -0.88
SP140-208ENST00000473711 NPIPB4C9JG80 1138 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 NPIPA2E9PIF3 369 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 NPIPA3F8WFD2 350 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 DCTN6O00399 190 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 TRAF3IP2O43734 574 aaPredicted RBP9.57□□□□□ -0.88
SP140-208ENST00000473711 SLC16A7O60669 478 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 GLCEO94923 617 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 INMTO95050 263 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 VAMP5O95183 116 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 SYNGR4O95473 234 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 LCKP06239 509 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 PAX7P23759 505 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 DCKP27707 260 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 CENPAP49450 140 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 ETV1P50549 477 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 RPS3AP61247 264 aaKnown RBP9.57□□□□□ -0.88
SP140-208ENST00000473711 CAMK2DQ13557 499 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 SLC35D3Q5M8T2 416 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 LCN1P1Q5VSP4 162 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 CARD17Q5XLA6 110 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 FAM205BPQ63HN1 556 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 PLXDC2Q6UX71 529 aa9.57□□□□□ -0.88
SP140-208ENST00000473711 B3GNT6Q6ZMB0 384 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms