RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OR52H1Q8NGJ2 320 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR5M8Q8NGP6 311 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR5M1Q8NGP8 315 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR2G2Q8NGZ5 317 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 GPX8Q8TED1 209 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MARC2Q969Z3 335 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SIPA1Q96FS4 1042 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 WDR92Q96MX6 357 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 DEFB118Q96PH6 123 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SCGB3A2Q96PL1 93 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SMAD5Q99717 465 aaKnown RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 C6orf106Q9H6K1 298 aaPredicted RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 TRPV4Q9HBA0 871 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 HPF1Q9NWY4 346 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 KCNE5Q9UJ90 142 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 PURGQ9UJV8 347 aaKnown RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 FBXL4Q9UKA2 621 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR10H1Q9Y4A9 318 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 TRAV18A0A075B6X5 111 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 A0A0J9YY10 115 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CENPVL1A0A0U1RR11 272 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MAGEB4O15481 346 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 FGF17O60258 216 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 RPP14O95059 124 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 SPDEFO95238 335 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 KAT7O95251 611 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR4E1P0C645 316 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 VSIG10L2P0DP72 767 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 RNH1P13489 461 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 HLA-GP17693 338 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MPZP25189 248 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 GALNSP34059 522 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 UBE2MP61081 183 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 DEFA5Q01523 94 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PAN3Q58A45 887 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 PRRT3Q5FWE3 981 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PDSS1Q5T2R2 415 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ARMC6Q6NXE6 501 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 KIRREL2Q6UWL6 708 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 RNF44Q7L0R7 432 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 RAB11FIP2Q7L804 512 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CA13Q8N1Q1 262 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ARL14Q8N4G2 192 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 STEAP2Q8NFT2 490 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PCNPQ8WW12 178 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 ARL11Q969Q4 196 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TMEM106AQ96A25 262 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 FAM3DQ96BQ1 224 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 LRRC46Q96FV0 321 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PTCHD1Q96NR3 888 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PHB2Q99623 299 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 GFI1Q99684 422 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 GDE1Q9NZC3 331 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MLXQ9UH92 298 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 NUMA1Q14980 2115 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 NPIPA5A0A0B4J1W7 369 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 A0A1W2PQU0 124 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR6C68A6NDL8 312 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR4C45A6NMZ5 311 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 A8MUA0 341 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 NPIPA7E9PJI5 369 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CYR61O00622 381 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PLRG1O43660 514 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 RAD1O60671 282 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 LDB3O75112 727 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 UPK3AO75631 287 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 WNT11O96014 354 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 NPIPA8P0DM63 369 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR8G3PP0DMU2 310 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 FSTP19883 344 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 RAB6AP20340 208 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PTNP21246 168 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TACR3P29371 465 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 POU3F4P49335 361 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CTXN1P60606 82 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ERVK-25P63136 954 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ADAM8P78325 824 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 FHL1Q13642 323 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ETFDHQ16134 617 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 TMEM255AQ5JRV8 349 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 LINC01590Q5TEZ4 76 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 AWAT2Q6E213 333 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 SLC18B1Q6NT16 456 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CSNK1A1LQ8N752 337 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 OR51S1Q8NGJ8 323 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 STK35Q8TDR2 534 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 MRPS24Q96EL2 167 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 TSNAXQ99598 290 aaKnown RBP5.57□□□□□ -1.52
HERC4-209ENST00000473533 TTTY10Q9BZA0 68 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 ATG5Q9H1Y0 275 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 FKRPQ9H9S5 495 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 CREBZFQ9NS37 354 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 C2orf42Q9NWW7 574 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 SLC2A8Q9NY64 477 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 PILRAQ9UKJ1 303 aa5.57□□□□□ -1.52
HERC4-209ENST00000473533 DHDHQ9UQ10 334 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms