RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CHST2Q9Y4C5 530 aa16.08■□□□□ 0.16
SORT1-203ENST00000471996 INSIG2Q9Y5U4 225 aa16.08■□□□□ 0.16
SORT1-203ENST00000471996 NBEAL2Q6ZNJ1 2754 aa16.08■□□□□ 0.16
SORT1-203ENST00000471996 MS4A18H0YCH9 400 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 HPRP00739 348 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 IGHMP01871 453 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 MT-ND5P03915 603 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 SLC3A1Q07837 685 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 MS4A18Q3C1V0 323 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 SPANXN4Q5MJ08 99 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 COX20Q5RI15 118 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
SORT1-203ENST00000471996 BRICD5Q6PL45 260 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 C9orf139Q6ZV77 190 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 PIWIL3Q7Z3Z3 882 aaKnown RBP16.07■□□□□ 0.16
SORT1-203ENST00000471996 NET1Q7Z628 596 aaPredicted RBP16.07■□□□□ 0.16
SORT1-203ENST00000471996 OR6N1Q8NGY5 312 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 TXNDC15Q96J42 360 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 CCDC115Q96NT0 180 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 MRI1Q9BV20 369 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 OR51B6Q9H340 312 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 BTNL2Q9UIR0 455 aa16.07■□□□□ 0.16
SORT1-203ENST00000471996 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
SORT1-203ENST00000471996 UBOX5O94941 541 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 OR8G3PP0DMU2 310 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 CCL2P13500 99 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 ZNF81P51508 661 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 LARS2Q15031 903 aaKnown RBP16.06■□□□□ 0.16
SORT1-203ENST00000471996 C5orf46Q6UWT4 87 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 NHLRC1Q6VVB1 395 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 C1QL4Q86Z23 238 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 LRRC34Q8IZ02 419 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 TRIML2Q8N7C3 387 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 OR4F5Q8NH21 305 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 UBE2FQ969M7 185 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 CDH20Q9HBT6 801 aa16.06■□□□□ 0.16
SORT1-203ENST00000471996 SNAP29O95721 258 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 GPANK1O95872 356 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 IGHV3-13P01766 116 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 DRD4P21917 467 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 CBLP22681 906 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 SERPINB5P36952 375 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 UCP2P55851 309 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 GLO1Q04760 184 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 DPY19L1Q2PZI1 675 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 OLFML2AQ68BL7 652 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 SLC38A4Q969I6 547 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 ZIM3Q96PE6 472 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 RBM4BQ9BQ04 359 aaKnown RBP16.05■□□□□ 0.16
SORT1-203ENST00000471996 SPATA9Q9BWV2 254 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 BCL2L14Q9BZR8 327 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 AKTIPQ9H8T0 292 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 C12orf10Q9HB07 376 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 TCF7L2Q9NQB0 619 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 ZNF232Q9UNY5 417 aa16.05■□□□□ 0.16
SORT1-203ENST00000471996 SOX21Q9Y651 276 aaPredicted RBP16.05■□□□□ 0.16
SORT1-203ENST00000471996 TRAV36DV7A0A075B6V5 113 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 A0A087WUJ7 227 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 FAM181BA6NEQ2 426 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 ZNF726A6NNF4 738 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 SPRY3O43610 288 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 IGHV1-46P01743 117 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 FAM153BP0C7A2 387 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 IGHV4-38-2P0DP08 117 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 NQO1P15559 274 aaKnown RBP16.04■□□□□ 0.16
SORT1-203ENST00000471996 RAG2P55895 527 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 HOXC5Q00444 222 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 ASPHD2Q6ICH7 369 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 JAZF1Q86VZ6 243 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 SLC22A24Q8N4F4 322 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 CPEB3Q8NE35 698 aaKnown RBP16.04■□□□□ 0.16
SORT1-203ENST00000471996 OR52E2Q8NGJ4 325 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 PANX1Q96RD7 426 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 C1orf198Q9H425 327 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 ARMC7Q9H6L4 198 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 NPHS2Q9NP85 383 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 CALML5Q9NZT1 146 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 P2RX2Q9UBL9 471 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 GPR45Q9Y5Y3 372 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 NPTNQ9Y639 398 aa16.04■□□□□ 0.16
SORT1-203ENST00000471996 IGKV1D-42A0A075B6H8 117 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 TM9SF1O15321 606 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 HOXA3O43365 443 aaPredicted RBP16.03■□□□□ 0.16
SORT1-203ENST00000471996 MFN2O95140 757 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 IGHV2-70P01814 119 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 SHBGP04278 402 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 S100A3P33764 101 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 CDKN2CP42773 168 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 SLC6A9P48067 706 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 CLNS1AP54105 237 aaKnown RBP16.03■□□□□ 0.16
SORT1-203ENST00000471996 CRISP3P54108 245 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 PAX8Q06710 450 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 PMS2P3Q13401 168 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 ZNF621Q6ZSS3 439 aa16.03■□□□□ 0.16
SORT1-203ENST00000471996 MIER2Q8N344 545 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms