RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 SORCS2Q96PQ0 1159 aa12.96□□□□□ -0.33
VPS8-221ENST00000471655 DOK1Q99704 481 aa12.96□□□□□ -0.33
VPS8-221ENST00000471655 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
VPS8-221ENST00000471655 ZNF224Q9NZL3 707 aa12.96□□□□□ -0.33
VPS8-221ENST00000471655 ABCA1O95477 2261 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 ELOVL7A1L3X0 281 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 KPNA4O00629 521 aaPredicted RBP12.95□□□□□ -0.34
VPS8-221ENST00000471655 GPRIN2O60269 458 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 MGRN1O60291 552 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 SERPINI2O75830 405 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 UBL3O95164 117 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 BCL10O95999 233 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 TSPAN19P0C672 248 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 PGA4P0DJD7 388 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 PGA3P0DJD8 388 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 UMPSP11172 480 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 CD79AP11912 226 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 ZNF35P13682 527 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 B4GALT1P15291 398 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 FUT1P19526 365 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NR4A1P22736 598 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 PDLIM4P50479 330 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 RAB1AP62820 205 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 SELENOWP63302 87 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NPRL3Q12980 569 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 PIN1Q13526 163 aaPredicted RBP12.95□□□□□ -0.34
VPS8-221ENST00000471655 DAG1Q14118 895 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NRN1LQ496H8 165 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 CYBRD1Q53TN4 286 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 LRFN4Q6PJG9 635 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NANOGNBQ7Z5D8 188 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 HIPK1Q86Z02 1210 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NKAIN4Q8IVV8 208 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 MICU2Q8IYU8 434 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 SEPHS2Q99611 448 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 RAB1BQ9H0U4 201 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 NOX3Q9HBY0 568 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 SPEF1Q9Y4P9 236 aa12.95□□□□□ -0.34
VPS8-221ENST00000471655 LOC390937A0A1W2PQ73 354 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 TMEM129A0AVI4 362 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 NPIPB13A6NJU9 1138 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 NPIPB4C9JG80 1138 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 BLOC1S5-TXNDC5H3BN57 136 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 hCG_2039718K7EN88 272 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 DHHO43323 396 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 CCDC22O60826 627 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 OR7A10O76100 309 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 OR8G3PP0DMU2 310 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 TNFRSF1BP20333 461 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 USF1P22415 310 aaPredicted RBP12.94□□□□□ -0.34
VPS8-221ENST00000471655 MDH1P40925 334 aaKnown RBP12.94□□□□□ -0.34
VPS8-221ENST00000471655 OR1E2P47887 323 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 EVX1P49640 407 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 UGT2B15P54855 530 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 PIGFQ07326 219 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 SF3A3Q12874 501 aaKnown RBP eCLIP12.94□□□□□ -0.34
VPS8-221ENST00000471655 DEF8Q6ZN54 512 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 DPPA2Q7Z7J5 298 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 TMEM255BQ8WV15 326 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 NEU4Q8WWR8 484 aaPredicted RBP12.94□□□□□ -0.34
VPS8-221ENST00000471655 RCN3Q96D15 328 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 VRK1Q99986 396 aaPredicted RBP12.94□□□□□ -0.34
VPS8-221ENST00000471655 MRPL13Q9BYD1 178 aaKnown RBP12.94□□□□□ -0.34
VPS8-221ENST00000471655 YAE1D1Q9NRH1 226 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 TMEM38BQ9NVV0 291 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 CMTM6Q9NX76 183 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 ARMCX1Q9P291 453 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
VPS8-221ENST00000471655 CHD3Q12873 2000 aaKnown RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 A0A1W2PRG6 482 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 A8MV72 311 aaPredicted RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 LY6HO94772 140 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 RAB36O95755 333 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 IGHG1P01857 330 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 SERPINA5P05154 406 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 GLRXP35754 106 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 PTDSS1P48651 473 aaKnown RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 ZNF133P52736 654 aaPredicted RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 RPL18Q07020 188 aaKnown RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 SNTB2Q13425 540 aaKnown RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 MELKQ14680 651 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 LRRC23Q53EV4 343 aaPredicted RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 C6orf52Q5T4I8 152 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 SLC15A3Q8IY34 581 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 ZNF540Q8NDQ6 660 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 PFN4Q8NHR9 129 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 MS4A3Q96HJ5 214 aa12.93□□□□□ -0.34
VPS8-221ENST00000471655 HOPXQ9BPY8 73 aaPredicted RBP12.93□□□□□ -0.34
VPS8-221ENST00000471655 PIMREGQ9BSJ6 248 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms