RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TBRG1Q3YBR2 411 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 OR9Q2Q8NGE9 314 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 BCL2L2Q92843 193 aaPredicted RBP17.31■□□□□ 0.36
HDAC7-220ENST00000471235 PLPPR2Q96GM1 343 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 TSPAN32Q96QS1 320 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 CHID1Q9BWS9 393 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 GLTPQ9NZD2 209 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 AMDHD2Q9Y303 409 aa17.31■□□□□ 0.36
HDAC7-220ENST00000471235 DSCAMO60469 2012 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF99A8MXY4 864 aaPredicted RBP17.3■□□□□ 0.36
HDAC7-220ENST00000471235 EBAG9O00559 213 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 TRMUO75648 421 aaKnown RBP17.3■□□□□ 0.36
HDAC7-220ENST00000471235 SEC14L2O76054 403 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 ACADSP16219 412 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 FPR3P25089 353 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 HOXC12P31275 282 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 CLRN1P58418 232 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 FXYD6P3P58550 94 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 RPL27P61353 136 aaKnown RBP17.3■□□□□ 0.36
HDAC7-220ENST00000471235 TAF11Q15544 211 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 ANKRD16Q6P6B7 361 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 SSX8Q7RTT4 187 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF519Q8TB69 540 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 NRGNQ92686 78 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 KATNB1Q9BVA0 655 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 MRPL13Q9BYD1 178 aaKnown RBP17.3■□□□□ 0.36
HDAC7-220ENST00000471235 REEP1Q9H902 201 aa17.3■□□□□ 0.36
HDAC7-220ENST00000471235 SAMHD1Q9Y3Z3 626 aaKnown RBP17.3■□□□□ 0.36
HDAC7-220ENST00000471235 PDZD2O15018 2839 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 A0A096LPE4 126 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 A0A1W2PPZ6 126 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 CENPBD1B2RD01 187 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 FKBP6O75344 327 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 PTP4A3O75365 173 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 CCNB2O95067 398 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 NDUFB2O95178 105 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 CST1P01037 141 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 HOXB6P17509 224 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 RPL4P36578 427 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 IFNGR2P38484 337 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 GSSP48637 474 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 NR1H2P55055 460 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 HIST3H3Q16695 136 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF770Q6IQ21 691 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 C1orf94Q6P1W5 598 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 KLHL24Q6TFL4 600 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 THSD4Q6ZMP0 1018 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 FANK1Q8TC84 345 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 MAGEE2Q8TD90 523 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 HDAC2Q92769 488 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 UTP4Q969X6 686 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 SLCO4A1Q96BD0 722 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 NDEL1Q9GZM8 345 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 NGBQ9NPG2 151 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 STX18Q9P2W9 335 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF346Q9UL40 294 aaKnown RBP17.29■□□□□ 0.36
HDAC7-220ENST00000471235 ADAM18Q9Y3Q7 739 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 U3KQV3 271 aa17.29■□□□□ 0.36
HDAC7-220ENST00000471235 POLQO75417 2590 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 ARPC4-TTLL3A0A0A6YYG9 625 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 CD14P08571 375 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF83P51522 516 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 ERVK-25P63136 954 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 MYBPC1Q00872 1141 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 NCMAPQ5T1S8 102 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 C1orf146Q5VVC0 180 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 FAM205BPQ63HN1 556 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 LRFN4Q6PJG9 635 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 FAM122BQ7Z309 247 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 LINC00471Q8N535 108 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 SYT14Q8NB59 555 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 PAPD5Q8NDF8 572 aaKnown RBP17.28■□□□□ 0.36
HDAC7-220ENST00000471235 GNPDA2Q8TDQ7 276 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 GPX7Q96SL4 187 aaPredicted RBP17.28■□□□□ 0.36
HDAC7-220ENST00000471235 KCNK17Q96T54 332 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 TMEM204Q9BSN7 226 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 PLEKHF2Q9H8W4 249 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 OBP2BQ9NPH6 170 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 POFUT2Q9Y2G5 429 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 TACC2O95359 2948 aa17.28■□□□□ 0.36
HDAC7-220ENST00000471235 DPRXA6NFQ7 191 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 QDPRP09417 244 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 ACVR1BP36896 505 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 TUBA1BP68363 451 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 TUBA4AP68366 448 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 BSPH1Q075Z2 132 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 TSPAN31Q12999 210 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 CCNIQ14094 377 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 C1QTNF12Q5T7M4 302 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 SMARCD3Q6STE5 483 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 TUBA1AQ71U36 451 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 ZNF627Q7L945 461 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 NMD3Q96D46 503 aaKnown RBP17.27■□□□□ 0.36
HDAC7-220ENST00000471235 Q96M85 177 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 FOXB1Q99853 325 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 ALG12Q9BV10 488 aa17.27■□□□□ 0.36
HDAC7-220ENST00000471235 ESRP2Q9H6T0 727 aaKnown RBP17.27■□□□□ 0.36
HDAC7-220ENST00000471235 CCM2LQ9NUG4 571 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms