RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SMAD9O15198 467 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SEC14L5O43304 696 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 OR6A2O95222 327 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 PMS2P2O95744 297 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 HSMCR30P0CW71 290 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 PAICSP22234 425 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 NAA10P41227 235 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 RPS27P42677 84 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 LHX2P50458 406 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 GGTLC2Q14390 218 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SPHARQ15513 63 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 ARMCX4Q5H9R4 360 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 EEF1A1P5Q5VTE0 462 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 C19orf48Q6RUI8 117 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 GPAT4Q86UL3 456 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 JAZF1Q86VZ6 243 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SYT14Q8NB59 555 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 ADPRHL1Q8NDY3 354 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF845Q96IR2 970 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SFXN2Q96NB2 322 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 KCNK17Q96T54 332 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SMAD5Q99717 465 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 ALG12Q9BV10 488 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 JAM3Q9BX67 310 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 MRPL13Q9BYD1 178 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 TTTY10Q9BZA0 68 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 TSPAN10Q9H1Z9 355 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 WDR76Q9H967 626 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 VSX1Q9NZR4 365 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 RSL24D1Q9UHA3 163 aaKnown RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 KLHDC2Q9Y2U9 406 aa7.43□□□□□ -1.22
GTF3A-206ENST00000470606 KLF13Q9Y2Y9 288 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SPIN1Q9Y657 262 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 SIRT4Q9Y6E7 314 aaPredicted RBP7.43□□□□□ -1.22
GTF3A-206ENST00000470606 TMEM129A0AVI4 362 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TVP23AA6NH52 213 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 NPIPB13A6NJU9 1138 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SNTNA6NMZ2 147 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 NPIPB4C9JG80 1138 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 E9PI62 339 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 EIF1AYO14602 144 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZNHIT1O43257 154 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 GLCEO94923 617 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 MPZL1O95297 269 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 CD46P15529 392 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 FKBP2P26885 142 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 RGS6P49758 472 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 AGFG1P52594 562 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 BIDP55957 195 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 CLDN18P56856 261 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 PPIAP62937 165 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SLC35A1P78382 337 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 VASNQ6EMK4 673 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZBTB46Q86UZ6 589 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TIGD4Q8IY51 512 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZFP41Q8N8Y5 198 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZIC4Q8N9L1 334 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 OR6K6Q8NGW6 343 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 C9orf43Q8TAL5 461 aaPredicted RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 FCGR1BQ92637 280 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 RNF166Q96A37 237 aaPredicted RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TRMT61AQ96FX7 289 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF385AQ96PM9 386 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 RNF167Q9H6Y7 350 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 VCX3AQ9NNX9 186 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 MRPL22Q9NWU5 206 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 NDUFA13Q9P0J0 144 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ENPP5Q9UJA9 477 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ING1Q9UK53 422 aaPredicted RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 B9D1Q9UPM9 204 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ERGIC3Q9Y282 383 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 PKD1L2Q7Z442 2459 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 NBASA2RRP1 2371 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 LOC102725191A0A1B0GVB3 256 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 A0A1W2PRG6 482 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SLC35F4A4IF30 521 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 CCDC160A6NGH7 325 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 KLRC4-KLRK1H3BQV0 150 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 CXCL13O43927 109 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SLC16A7O60669 478 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TRMUO75648 421 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 BCL10O95999 233 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 CD36P16671 472 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF708P17019 499 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 GTF2E2P29084 291 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TTKP33981 857 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ATP6V1E1P36543 226 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 WNT4P56705 351 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 LSM3P62310 102 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 LGALS3BPQ08380 585 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SLC17A1Q14916 467 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 SPCS2Q15005 226 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 PON3Q15166 354 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 C3AR1Q16581 482 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TSTQ16762 297 aaKnown RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 TMEM225Q6GV28 225 aa7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF322Q6U7Q0 402 aaPredicted RBP7.42□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF367Q7RTV3 350 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms