RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ZNF503-AS2A6NEH8 195 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 B2RBV5 119 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 CENPBD1B2RD01 187 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 SEMG1P04279 462 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 CBR1P16152 277 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 RHCEP18577 417 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MAKP20794 623 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MSX2P35548 267 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-215ENST00000470338 TUBA1BP68363 451 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 TUBA4AP68366 448 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MXRA7P84157 204 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 FHL1Q13642 323 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MELKQ14680 651 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 ANKDD1AQ495B1 522 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 IQCCQ4KMZ1 466 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 Q5PR19 223 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 TBPL2Q6SJ96 375 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 B3GLCTQ6Y288 498 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MBOAT2Q6ZWT7 520 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 TUBA1AQ71U36 451 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MOSPD2Q8NHP6 518 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 ASB10Q8WXI3 467 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 PERPQ96FX8 193 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 PYURFQ96I23 114 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 TRAF4Q9BUZ4 470 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-215ENST00000470338 MRPL13Q9BYD1 178 aaKnown RBP12.32□□□□□ -0.44
TOP3B-215ENST00000470338 DLL4Q9NR61 685 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 FAIMQ9NVQ4 179 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 POFUT2Q9Y2G5 429 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 A0A1W2PRQ8 180 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ARPC2O15144 300 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 SEC14L2O76054 403 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 TTKP33981 857 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ARR3P36575 388 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 VLDLRP98155 873 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 RUNX1T1Q06455 604 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 DGCR6Q14129 220 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ARMC4Q5T2S8 1044 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF730Q6ZMV8 503 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF813Q6ZN06 617 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 TMPRSS11FQ6ZWK6 438 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 PIWIL3Q7Z3Z3 882 aaKnown RBP12.31□□□□□ -0.44
TOP3B-215ENST00000470338 LRRC75AQ8NAA5 344 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 SLC7A13Q8TCU3 470 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 DHRS1Q96LJ7 313 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 FOXB1Q99853 325 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 KATNB1Q9BVA0 655 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 POU2F3Q9UKI9 436 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 MOKQ9UQ07 419 aa12.31□□□□□ -0.44
TOP3B-215ENST00000470338 FAM32AQ9Y421 112 aaKnown RBP12.31□□□□□ -0.44
TOP3B-215ENST00000470338 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 DHHO43323 396 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 IGHG1P01857 330 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 H1F0P07305 194 aaKnown RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 QDPRP09417 244 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 CECR9P0C854 216 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 B4GALT1P15291 398 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 FOSL1P15407 271 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ACADSP16219 412 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 CALB2P22676 271 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 SLC9A3P48764 834 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 DAP3P51398 398 aaKnown RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 NAAAQ02083 359 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 TAF11Q15544 211 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ALG10Q5BKT4 473 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 AGAP6Q5VW22 663 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 C11orf71Q6IPW1 123 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 PODNL1Q6PEZ8 512 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 HDDC2Q7Z4H3 204 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 YTHDF3Q7Z739 585 aaKnown RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 MDP1Q86V88 176 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 CDK20Q8IZL9 346 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 NSMCE2Q96MF7 247 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF75AQ96N20 296 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 TNFRSF13CQ96RJ3 184 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF224Q9NZL3 707 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 STX18Q9P2W9 335 aaKnown RBP12.3□□□□□ -0.44
TOP3B-215ENST00000470338 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
TOP3B-215ENST00000470338 RTTNQ86VV8 2226 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 MTORP42345 2549 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 EFCAB9A8MZ26 197 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 hCG_2039718K7EN88 272 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CDC42EP2O14613 210 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 TRMUO75648 421 aaKnown RBP12.29□□□□□ -0.44
TOP3B-215ENST00000470338 IGHMP01871 453 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CRYAAP02489 173 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 CELA3BP08861 270 aa12.29□□□□□ -0.44
TOP3B-215ENST00000470338 SAGP10523 405 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms