RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SKA3Q8IX90 412 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 C20orf196Q8IYI0 205 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 LRRC34Q8IZ02 419 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 SLC30A7Q8NEW0 376 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 PANX1Q96RD7 426 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 DCLRE1CQ96SD1 692 aaKnown RBP7.74□□□□□ -1.17
CCDC171-204ENST00000470191 FOXB1Q99853 325 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 SH3GL3Q99963 347 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 SLITRK2Q9H156 845 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 AKTIPQ9H8T0 292 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 ZMAT3Q9HA38 289 aaKnown RBP7.74□□□□□ -1.17
CCDC171-204ENST00000470191 PLEK2Q9NYT0 353 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 LEF1Q9UJU2 399 aaPredicted RBP7.74□□□□□ -1.17
CCDC171-204ENST00000470191 AUP1Q9Y679 476 aa7.74□□□□□ -1.17
CCDC171-204ENST00000470191 A0A096LPI6 279 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF726A6NNF4 738 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 MS4A18H0YCH9 400 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 TRAPPC2LH3BP13 241 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 ALX3O95076 343 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 UBL3O95164 117 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 SBK2P0C263 348 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 ETFAP13804 333 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 GCH1P30793 250 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 ANXA11P50995 505 aaKnown RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 LARS2Q15031 903 aaKnown RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 MAPK11Q15759 364 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 SMU1Q2TAY7 513 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 MS4A18Q3C1V0 323 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 SPATA46Q5T0L3 261 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 H1FNTQ75WM6 255 aaPredicted RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 C10orf53Q8N6V4 93 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 DEFB108BQ8NET1 73 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 C11orf40Q8WZ69 217 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 POP5Q969H6 163 aaKnown RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 UBE2FQ969M7 185 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 APOPT1Q96IL0 206 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 C16orf45Q96MC5 204 aaPredicted RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 RHOXF2Q9BQY4 288 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 CACYBPQ9HB71 228 aaKnown RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 EGFL7Q9UHF1 273 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 PURGQ9UJV8 347 aaKnown RBP7.73□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF232Q9UNY5 417 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 DSPPQ9NZW4 1301 aa7.73□□□□□ -1.17
CCDC171-204ENST00000470191 SLC22A23A1A5C7 686 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 LRRN3E7EW58 273 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 E9PBE3 544 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 C11orf98E9PRG8 122 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ITM2AO43736 263 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 FOXH1O75593 365 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 MT-ND5P03915 603 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SERPINA5P05154 406 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 IGHV4-38-2P0DP08 117 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF250P15622 560 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 CCNOP22674 350 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 AHCYP23526 432 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 CRATP43155 626 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 CSNK1A1P48729 337 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF81P51508 661 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SEC61A1P61619 476 aaKnown RBP7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF154Q13106 437 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 PMS2P3Q13401 168 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SPRNQ5BIV9 151 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 FAM69AQ5T7M9 428 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 IFT20Q8IY31 132 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 TRIML2Q8N7C3 387 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 MNS1Q8NEH6 495 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 OR1J1Q8NGS3 322 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 WFDC12Q8WWY7 111 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 GEMIN6Q8WXD5 167 aaKnown RBP7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SLC38A4Q969I6 547 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 TESCQ96BS2 214 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ELMOD3Q96FG2 381 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 TEX37Q96LM6 180 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 CCDC115Q96NT0 180 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 MRI1Q9BV20 369 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SPATA9Q9BWV2 254 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 TXLNGYQ9BZA5 131 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 DCAF16Q9NXF7 216 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ASIC5Q9NY37 505 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 SLCO1C1Q9NYB5 712 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 NKIRAS2Q9NYR9 191 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 P2RX2Q9UBL9 471 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 TRIM33Q9UPN9 1127 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 ZNF281Q9Y2X9 895 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 CHST2Q9Y4C5 530 aa7.72□□□□□ -1.17
CCDC171-204ENST00000470191 PRKDCP78527 4128 aaKnown RBP7.72□□□□□ -1.17
CCDC171-204ENST00000470191 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 TRAV36DV7A0A075B6V5 113 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 A0A087WUJ7 227 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 WDR91A4D1P6 747 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 M0QZ24 198 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 HOXA3O43365 443 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-204ENST00000470191 OR2T1O43869 369 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 IGHV1-46P01743 117 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 CRYBA1P05813 215 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 MPV17P39210 176 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 CLNS1AP54105 237 aaKnown RBP7.71□□□□□ -1.18
CCDC171-204ENST00000470191 CRISP3P54108 245 aa7.71□□□□□ -1.18
CCDC171-204ENST00000470191 UCP2P55851 309 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms