RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MRPL53Q96EL3 112 aaKnown RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SNF8Q96H20 258 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 CAPNS2Q96L46 248 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 JSRP1Q96MG2 331 aaPredicted RBP3.3□□□□□ -1.88
COL11A1-208ENST00000470170 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 OR2AG1Q9H205 316 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 PTTG3PQ9NZH4 202 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 SLC17A7Q9P2U7 560 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 CLN8Q9UBY8 286 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 MIOXQ9UGB7 285 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 KPTNQ9Y664 436 aa3.3□□□□□ -1.88
COL11A1-208ENST00000470170 ATP10DQ9P241 1426 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 CCDC7Q96M83 1385 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 GOLGA6L4A6NEF3 574 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 B4DXG7 233 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 LIN7AO14910 233 aaPredicted RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 RAB29O14966 203 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 CLOCKO15516 846 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 CFLARO15519 480 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 TSPAN2O60636 221 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 FADS2O95864 444 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 CST4P01036 141 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 RPN2P04844 631 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SERPINE2P07093 398 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 DCNP07585 359 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 STSP08842 583 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SLC35G4P0C7Q5 338 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 UGT1A5P35504 534 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 HNRNPA3P51991 378 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 GTF2A1P52655 376 aaPredicted RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 EFNA3P52797 238 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 EFNB2P52799 333 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 RAB10P61026 200 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 REEP5Q00765 189 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 GLO1Q04760 184 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SRYQ05066 204 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 GRB7Q14451 532 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 ZNF691Q5VV52 312 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SLX4IPQ5VYV7 408 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 TIGD3Q6B0B8 471 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 TTC33Q6PID6 262 aaPredicted RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 CMTM8Q8IZV2 173 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 Q8N9L7 120 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 C19orf18Q8NEA5 215 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 OR2L3Q8NG85 312 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 TMEM239Q8WW34 195 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SMARCD2Q92925 531 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 NAT6Q93015 286 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 C8orf44Q96CB5 159 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SLC30A2Q9BRI3 323 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 POTEKPQ9BYX7 375 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 ZC4H2Q9NQZ6 224 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 C8orf4Q9NR00 106 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 NANSQ9NR45 359 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 TREX1Q9NSU2 369 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 ELOVL2Q9NXB9 296 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 USE1Q9NZ43 259 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 MYEF2Q9P2K5 600 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 APOBEC3BQ9UH17 382 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 SLC7A8Q9UHI5 535 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 EMCNQ9ULC0 261 aa3.29□□□□□ -1.88
COL11A1-208ENST00000470170 DIMT1Q9UNQ2 313 aaKnown RBP3.29□□□□□ -1.88
COL11A1-208ENST00000470170 PLB1Q6P1J6 1458 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 POLR3AO14802 1390 aaPredicted RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 LRPPRCP42704 1394 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 PNPLA6Q8IY17 1366 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 GRIN2DO15399 1336 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 A0A1B0GW15 77 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CCDC182A6NF36 153 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CENPXA8MT69 81 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 NPIPA7E9PJI5 369 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 RNASEK-C17orf49H0YIS7 233 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 DLGAP1O14490 977 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 AIM2O14862 343 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 HSBP1O75506 76 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 SEMA3DO95025 777 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ETHE1O95571 254 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 TXNDC12O95881 172 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 GSTA1P08263 222 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ANXA5P08758 320 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 NPIPA8P0DM63 369 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CYP11B1P15538 503 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 SYT1P21579 422 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 TBXA2RP21731 343 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 UGT2B10P36537 528 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 SLC26A3P40879 764 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 MAGEA2P43356 314 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 NOVA1P51513 510 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 RPS6P62753 249 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 ADARB1P78563 741 aaKnown RBP3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CDKL1Q00532 357 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 IL9RQ01113 521 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 GK3PQ14409 553 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 MOGQ16653 247 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 CDKN3Q16667 212 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 KYAT1Q16773 422 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 GOLGA7BQ2TAP0 167 aa3.28□□□□□ -1.88
COL11A1-208ENST00000470170 VPS26BQ4G0F5 336 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms