RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 NMUR2Q9GZQ4 415 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 HINT3Q9NQE9 182 aaKnown RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF180Q9UJW8 692 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TMCO1Q9UM00 188 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 NFU1Q9UMS0 254 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 FIS1Q9Y3D6 152 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 RNF114Q9Y508 228 aa4.43□□□□□ -1.7
PTPN4-209ENST00000469511 TRAV40A0A0B4J280 105 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ISPDA4D126 451 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 RPL36A-HNRNPH2H7BZ11 118 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 M0R3G1 203 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 EIF1BO60739 113 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 SCN2BO60939 215 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 SLC43A1O75387 559 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CLPXO76031 633 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PLATP00750 562 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CHRM4P08173 479 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 SBK2P0C263 348 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 LINC00032P0C843 101 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 GKN3PP0CG01 181 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 OR8G3PP0DMU2 310 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 OR12D1P0DN82 309 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 MATN1P21941 496 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 SLC6A9P48067 706 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PTDSS1P48651 473 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CLK1P49759 484 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PRKAA2P54646 552 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PKNOX1P55347 436 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 LGALS4P56470 323 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 RPL38P63173 70 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 HBA1P69905 142 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 KCNJ10P78508 379 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PAX2Q02962 417 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PAX8Q06710 450 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 LCP2Q13094 533 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 NAB1Q13506 487 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CHI3L2Q15782 390 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ARHGAP11BQ3KRB8 267 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 C1QTNF12Q5T7M4 302 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CARD17Q5XLA6 110 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 AP1ARQ63HQ0 302 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 EIF3MQ7L2H7 374 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 C6orf120Q7Z4R8 191 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CLECL1Q8IZS7 167 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PARP8Q8N3A8 854 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 KRTCAP2Q8N6L1 136 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 POU5F2Q8N7G0 328 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 CCNYL1Q8N7R7 359 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 OR52E2Q8NGJ4 325 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 OR4F5Q8NH21 305 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 FAM76AQ8TAV0 307 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 TSPEARQ8WU66 669 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 DCAKDQ8WVC6 231 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ARL8AQ96BM9 186 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 L3HYPDHQ96EM0 354 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 TXNDC15Q96J42 360 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PRPF18Q99633 342 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 EMC6Q9BV81 110 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 LINC00470Q9BZP3 86 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF350Q9GZX5 532 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 OR51I1Q9H343 314 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF385DQ9H6B1 395 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ZMAT3Q9HA38 289 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 NINJ2Q9NZG7 142 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 B3GAT1Q9P2W7 334 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 ATP6V1HQ9UI12 483 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 EMCNQ9ULC0 261 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 PCDHGB4Q9UN71 923 aa4.42□□□□□ -1.7
PTPN4-209ENST00000469511 FAF1Q9UNN5 650 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 SPIN1Q9Y657 262 aaPredicted RBP4.42□□□□□ -1.7
PTPN4-209ENST00000469511 IGLV3-9A0A075B6K5 115 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 PPIAL4EA0A075B759 164 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 PPIAL4CA0A0B4J2A2 164 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 ZSCAN5BA6NJL1 495 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 SRRM5B3KS81 715 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 TMEM233B4DJY2 109 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 CLDN25C9JDP6 229 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 FTCDNL1E5RQL4 147 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 PPIAL4DF5H284 164 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 POC1B-GALNT4F8VUJ3 575 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 G3V2L1 256 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 ANKRD28O15084 1053 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 ZNF208O43345 1280 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 FRS3O43559 492 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 SPRY3O43610 288 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 STX11O75558 287 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 FOXH1O75593 365 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 NDUFA7O95182 113 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 HPRP00739 348 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 IGHV2-70P01814 119 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 GPIP06744 558 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 INHBAP08476 426 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 MELTFP08582 738 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 PPIAL4FP0DN26 164 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 HLA-DOBP13765 273 aa4.41□□□□□ -1.7
PTPN4-209ENST00000469511 B4GALT1P15291 398 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms