RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 LRFN4Q6PJG9 635 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC35D2Q76EJ3 337 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 PIWIL3Q7Z3Z3 882 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 PATL1Q86TB9 770 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 SNX32Q86XE0 403 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 SKA3Q8IX90 412 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 LRRC17Q8N6Y2 441 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 FGFBP3Q8TAT2 258 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 ADAMTS16Q8TE57 1224 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 UBASH3BQ8TF42 649 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 MRPL24Q96A35 216 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 TAMM41Q96BW9 452 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 ZNF426Q9BUY5 554 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 MRPL37Q9BZE1 423 aaKnown RBP12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 PCDHAC1Q9H158 963 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
SDCCAG3-209ENST00000468963 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 HMGB1P1B2RPK0 211 aaPredicted RBP12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 C11orf98E9PRG8 122 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 ANGPT2O15123 496 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 SERPINI2O75830 405 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 OR6A2O95222 327 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 PATE4P0C8F1 98 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 PCGF2P35227 344 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 GIPRP48546 466 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 PTDSS1P48651 473 aaKnown RBP12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 NFYCQ13952 458 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 FXNQ16595 210 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 TTC33Q6PID6 262 aaPredicted RBP12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 CCDC80Q76M96 950 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 ZNF584Q8IVC4 421 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC30A8Q8IWU4 369 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 OR10A6Q8NH74 314 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 MPP4Q96JB8 637 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 PRSS27Q9BQR3 290 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC19A3Q9BZV2 496 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 CHODLQ9H9P2 273 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 NANSQ9NR45 359 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 SPEF1Q9Y4P9 236 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
SDCCAG3-209ENST00000468963 LYNX1G3V0Z9 82 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 FBP2O00757 339 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SYNGR3O43761 229 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 EDF1O60869 148 aaKnown RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SERPINA5P05154 406 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 ERCC1P07992 297 aaPredicted RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 LYNX1P0DP58 116 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SRD5A1P18405 259 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 IL2RGP31785 369 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 RAB39AQ14964 217 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 TRMT5Q32P41 509 aaKnown RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 NANOGP8Q6NSW7 305 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 LRP11Q86VZ4 500 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC22A24Q8N4F4 322 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 VANGL1Q8TAA9 524 aaPredicted RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 HPS1Q92902 700 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC25A44Q96H78 314 aaPredicted RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 C1orf159Q96HA4 380 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 NANOGQ9H9S0 305 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 DYNLRB1Q9NP97 96 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 MEPEQ9NQ76 525 aaPredicted RBP12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 ZNF229Q9UJW7 825 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC7A7Q9UM01 511 aa12.73□□□□□ -0.37
SDCCAG3-209ENST00000468963 DHHO43323 396 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 UBL3O95164 117 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 CHN2P52757 468 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 SEC24CP53992 1094 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 VMACQ2NL98 169 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 ELFN2Q5R3F8 820 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 INTS11Q5TA45 600 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 HDXQ7Z353 690 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 CALHM3Q86XJ0 350 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 NPHS2Q9NP85 383 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 TMEM38BQ9NVV0 291 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 FBXL3Q9UKT7 428 aa12.72□□□□□ -0.37
SDCCAG3-209ENST00000468963 RNF13O43567 381 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 RAB36O95755 333 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 HIST1H2ABP04908 130 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 QDPRP09417 244 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 PGA4P0DJD7 388 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 PGA3P0DJD8 388 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 OR8G3PP0DMU2 310 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 COL8A2P25067 703 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 CYLC2Q14093 348 aaPredicted RBP12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 TRIP10Q15642 601 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 CR1LQ2VPA4 569 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 HIST3H2AQ7L7L0 130 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 SLC26A7Q8TE54 656 aa12.71□□□□□ -0.37
SDCCAG3-209ENST00000468963 HIST1H2ACQ93077 130 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms