RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SMAD3P84022 425 aaKnown RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 H3F3AP84243 136 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CDK6Q00534 326 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CDC42EP1Q00587 391 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 MC1RQ01726 317 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CAPSQ13938 189 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 IQCJQ1A5X6 159 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DCAF4L1Q3SXM0 396 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PLEKHN1Q494U1 663 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 C14orf28Q4W4Y0 310 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 EOGTQ5NDL2 527 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CPTPQ5TA50 214 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 MARC1Q5VT66 337 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 REEP3Q6NUK4 255 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CDC42EP5Q6NZY7 148 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 C1orf94Q6P1W5 598 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ANKRD16Q6P6B7 361 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ULK3Q6PHR2 472 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CLEC9AQ6UXN8 241 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 B3GLCTQ6Y288 498 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 Q6ZPB1 254 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GPRIN1Q7Z2K8 1008 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ADCK2Q7Z695 626 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ADIPOR2Q86V24 386 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GCNT2Q8N0V5 402 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GALNT16Q8N428 558 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SYT8Q8NBV8 401 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 NUP43Q8NFH3 380 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR5AP2Q8NGF4 316 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR5D16Q8NGK9 328 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR5AK2Q8NH90 309 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 FIBINQ8TAL6 211 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF671Q8TAW3 534 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 STT3BQ8TCJ2 826 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 NEK7Q8TDX7 302 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SH3RF2Q8TEC5 729 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ROBO4Q8WZ75 1007 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 FBXO32Q969P5 355 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 TM4SF18Q96CE8 201 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 LINGO1Q96FE5 620 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PIK3IP1Q96FE7 263 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GALNT14Q96FL9 552 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 APIPQ96GX9 242 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PIWIL1Q96J94 861 aaKnown RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 BTF3L4Q96K17 158 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZFP3Q96NJ6 502 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CLCC1Q96S66 551 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GPR20Q99678 358 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 MYOCQ99972 504 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DDA1Q9BW61 102 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ADGRE3Q9BY15 652 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SLITRK2Q9H156 845 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SLC32A1Q9H598 525 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 GP6Q9HCN6 339 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 APMAPQ9HDC9 416 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PXMP2Q9NR77 195 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 SLC17A5Q9NRA2 495 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 AP5S1Q9NUS5 200 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 RLIMQ9NVW2 624 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 TVP23BQ9NYZ1 205 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DNAJB11Q9UBS4 358 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 CACFD1Q9UGQ2 172 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 DKKL1Q9UK85 242 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR52A1Q9UKL2 312 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 FZD1Q9UP38 647 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 RCE1Q9Y256 329 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF281Q9Y2X9 895 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 PRG3Q9Y2Y8 225 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-207ENST00000468925 OR10H1Q9Y4A9 318 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 MMACHCQ9Y4U1 282 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 MMP24Q9Y5R2 645 aa4.44□□□□□ -1.7
SF3B1-207ENST00000468925 ALPK3Q96L96 1907 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 A0A1B0GTI1 187 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TRBC2A0A5B9 178 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 C7orf77A4D0Y5 90 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 NPEPPSL1A6NEC2 478 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OTOL1A6NHN0 477 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 YDJCA8MPS7 323 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 FAM171A2A8MVW0 826 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CDRT15L2A8MXV6 281 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ANHXE9PGG2 379 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 K7EP13 123 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SLC16A5O15375 505 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 INSIG1O15503 277 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 LDB2O43679 373 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR10H2O60403 315 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CDC14BO60729 498 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CYTIPO60759 359 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 NME6O75414 186 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 CLDN11O75508 207 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 SLCO2B1O94956 709 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 PRAMEF12O95522 483 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ACTL6AO96019 429 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 PPBPP02775 128 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 C8GP07360 202 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 GALTP07902 379 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF888P0CJ79 500 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-207ENST00000468925 AKAIN1P0CW23 69 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 OR5H8P0DN80 308 aa4.43□□□□□ -1.7
SF3B1-207ENST00000468925 TFPIP10646 304 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms