RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ISG20L2Q9H9L3 353 aaKnown RBP16.99■□□□□ 0.31
SMC4-209ENST00000468653 NDUFB11Q9NX14 153 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 B3GAT1Q9P2W7 334 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 A0A0J9YW62 118 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 KLRC4-KLRK1H3BQV0 150 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 DLL1O00548 723 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 TNFSF11O14788 317 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 EIF1BO60739 113 aaKnown RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 MT-ND5P03915 603 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 PAX7P23759 505 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 PSMA1P25786 263 aaKnown RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 CENPAP49450 140 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 RPS3AP61247 264 aaKnown RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 TPBGQ13641 420 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 ZNF239Q16600 458 aaKnown RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 DEFB109BQ30KR1 87 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 KLBQ86Z14 1044 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 NAA11Q9BSU3 229 aaPredicted RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 ZNF703Q9H7S9 590 aaPredicted RBP16.98■□□□□ 0.31
SMC4-209ENST00000468653 BABAM2Q9NXR7 383 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 B9D1Q9UPM9 204 aa16.98■□□□□ 0.31
SMC4-209ENST00000468653 ZNF814B7Z6K7 855 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 BIDP55957 195 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ACSM1Q08AH1 577 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 SLC16A9Q7RTY1 509 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ALPK2Q86TB3 2170 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ZBTB46Q86UZ6 589 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ZFP41Q8N8Y5 198 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 SYT14Q8NB59 555 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 NDNFQ8TB73 568 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ZHX1-C8orf76Q96EF9 292 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 MRPL48Q96GC5 212 aaKnown RBP16.97■□□□□ 0.31
SMC4-209ENST00000468653 TTTY12Q9BZ98 90 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 EXOSC4Q9NPD3 245 aaKnown RBP16.97■□□□□ 0.31
SMC4-209ENST00000468653 RASD1Q9Y272 281 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 TVP23AA6NH52 213 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 FAM166BA8MTA8 275 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 J3QLW9 94 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 EIF1AYO14602 144 aaKnown RBP16.97■□□□□ 0.31
SMC4-209ENST00000468653 LALBAP00709 142 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 HLA-DQA2P01906 255 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ZNF19P17023 458 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 ZNF43P17038 809 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 POU3F2P20265 443 aaPredicted RBP16.97■□□□□ 0.31
SMC4-209ENST00000468653 SDHBP21912 280 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 CRABP1P29762 137 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 MEOX1P50221 254 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 SSX6Q7RTT6 188 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 FDCSPQ8NFU4 85 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 C4orf36Q96KX1 117 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 TIMP4Q99727 224 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 EMC6Q9BV81 110 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 TTTY10Q9BZA0 68 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 STUB1Q9UNE7 303 aa16.97■□□□□ 0.31
SMC4-209ENST00000468653 FREM3P0C091 2139 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 ZNF670-ZNF695F2Z2N8 137 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 LINC01387J3KSC0 135 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 RAMP1O60894 148 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 KLK2P20151 261 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 TGFBR1P36897 503 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 BLVRAP53004 296 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 CLDN20P56880 219 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 ACTA2P62736 377 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 ACTG2P63267 376 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 BDH1Q02338 343 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 DNM1P34Q6PK57 102 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 TIGD4Q8IY51 512 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 UBQLNLQ8IYU4 475 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 RFLNBQ8N5W9 214 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 SNX33Q8WV41 574 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 KCNK17Q96T54 332 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 MYCBPQ99417 103 aaPredicted RBP16.96■□□□□ 0.31
SMC4-209ENST00000468653 CENPOQ9BU64 300 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 TRIM36Q9NQ86 728 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 SSR3Q9UNL2 185 aa16.96■□□□□ 0.31
SMC4-209ENST00000468653 FREM2Q5SZK8 3169 aa16.96■□□□□ 0.3
SMC4-209ENST00000468653 LOC102725191A0A1B0GVB3 256 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 KLK10O43240 276 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 GPX5O75715 221 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 HPNP05981 417 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 CTLA4P16410 223 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 SPINK2P20155 84 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 PEX19P40855 299 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 CAPZA2P47755 286 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 STARP49675 285 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 CARD18P57730 90 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 OR12D2P58182 307 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 H3F3AP84243 136 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 HSF2Q03933 536 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 SOWAHCQ53LP3 525 aaPredicted RBP16.95■□□□□ 0.3
SMC4-209ENST00000468653 ZNF766Q5HY98 468 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 HBMQ6B0K9 141 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 NHLRC1Q6VVB1 395 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 TMEM178AQ8NBL3 297 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 OR6N2Q8NGY6 317 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 TMEM203Q969S6 136 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 INTS14Q96SY0 518 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 COPS3Q9UNS2 423 aa16.95■□□□□ 0.3
SMC4-209ENST00000468653 NCKAP5O14513 1909 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms