RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SOD3P08294 240 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 ADORA3P0DMS8 318 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 CPEP16870 476 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 FUT4P22083 530 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 UGT2B15P54855 530 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 NKX6-1P78426 367 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 ROR2Q01974 943 aaKnown RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 POU3F1Q03052 451 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 ST3GAL3Q11203 375 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 FOXD4Q12950 439 aaPredicted RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 C3orf36Q3SXR2 165 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 HIKESHIQ53FT3 197 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 HMBOX1Q6NT76 420 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 ANKRD16Q6P6B7 361 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 KLHL17Q6TDP4 642 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 TSEN54Q7Z6J9 526 aaKnown RBP9.73□□□□□ -0.85
COL4A6-205ENST00000468338 DTX2Q86UW9 622 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 C10orf53Q8N6V4 93 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 WFDC11Q8NEX6 87 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 TMEM239Q8WW34 195 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 TPD52L3Q96J77 140 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 CLUHP3Q96NS8 147 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 LRRC37BQ96QE4 947 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 SPAG4Q9NPE6 437 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 MAN2C1Q9NTJ4 1040 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 C20orf141Q9NUB4 165 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 MED29Q9NX70 200 aa9.73□□□□□ -0.85
COL4A6-205ENST00000468338 E7EQL1 145 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 KPNA4O00629 521 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 WNT11O96014 354 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 IGKV3-15P01624 115 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 IGLV1-44P01699 117 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CD8AP01732 235 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 HSD17B1P14061 328 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CD99P14209 185 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 IFNGR1P15260 489 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 FUT1P19526 365 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 AHCYP23526 432 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 ZNF83P51522 516 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 ARF1P84077 181 aaKnown RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CEACAM16Q2WEN9 425 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 IFI44LQ53G44 452 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 GPR137CQ8N3F9 429 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 OR6X1Q8NH79 312 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 PFN4Q8NHR9 129 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 SMAP2Q8WU79 429 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 TMEM255BQ8WV15 326 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 TMEM171Q8WVE6 324 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 GEMIN6Q8WXD5 167 aaKnown RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 ADAD1Q96M93 576 aaKnown RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CCT8L2Q96SF2 557 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 SEPHS2Q99611 448 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 KCTD14Q9BQ13 255 aaPredicted RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 EMC6Q9BV81 110 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 GORASP2Q9H8Y8 452 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CRLF2Q9HC73 371 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 MOV10Q9HCE1 1003 aaKnown RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 ARL8BQ9NVJ2 186 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CISD1Q9NZ45 108 aaKnown RBP9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CD300AQ9UGN4 299 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 LAMP3Q9UQV4 416 aa9.72□□□□□ -0.85
COL4A6-205ENST00000468338 CSPG4Q6UVK1 2322 aa9.71□□□□□ -0.85
COL4A6-205ENST00000468338 NPIPB13A6NJU9 1138 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 ZNF726A6NNF4 738 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 ZNF99A8MXY4 864 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-205ENST00000468338 NPIPB4C9JG80 1138 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 M0R1B8 84 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 GSTA4O15217 222 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 ARHGEF9O43307 516 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 DCTN3O75935 186 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 OR7A10O76100 309 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 OR6A2O95222 327 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 SERPINA1P01009 418 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 IFNW1P05000 195 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 FOSL1P15407 271 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 CDH2P19022 906 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-205ENST00000468338 RAB6AP20340 208 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 PTH2RP49190 550 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 RPL18Q07020 188 aaKnown RBP9.71□□□□□ -0.86
COL4A6-205ENST00000468338 SPOCK1Q08629 439 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 CAMK2DQ13557 499 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 KRT72Q14CN4 511 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 IQCCQ4KMZ1 466 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 GLYATQ6IB77 296 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 KLHL24Q6TFL4 600 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 B3GLCTQ6Y288 498 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 SLC35D2Q76EJ3 337 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 CCDC36Q8IYA8 594 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 RNF141Q8WVD5 230 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 TMEM54Q969K7 222 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 SGTBQ96EQ0 304 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 CCDC140Q96MF4 163 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 DHRS9Q9BPW9 319 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 TRAF4Q9BUZ4 470 aaPredicted RBP9.71□□□□□ -0.86
COL4A6-205ENST00000468338 C1QTNF6Q9BXI9 259 aa9.71□□□□□ -0.86
COL4A6-205ENST00000468338 MRPL13Q9BYD1 178 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms