RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CNIH3Q8TBE1 160 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 PIH1D2Q8WWB5 315 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 PTH2Q96A98 100 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 GPR174Q9BXC1 333 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 C11orf54Q9H0W9 315 aaPredicted RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 PLEKHA1Q9HB21 404 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 Q9N2K0 584 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 LANCL2Q9NS86 450 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 MRPS18CQ9Y3D5 142 aaKnown RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 ALG5Q9Y673 324 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 TP53BP1Q12888 1972 aaPredicted RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 M0QYG6 137 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 TM4SF5O14894 197 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SYNGR3O43761 229 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 HUS1O60921 280 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SH3BGRLO75368 114 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SC5DO75845 299 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 RPLP0P05388 317 aaKnown RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 CD5P06127 495 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SMIM6P0DI80 62 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 DAOP14920 347 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 RPS3P23396 243 aaKnown RBP eCLIP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 GDNFP39905 211 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 PGGT1BP53609 377 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 LSM11P83369 360 aaKnown RBP eCLIP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SPEM2Q0P670 501 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 EXOSC2Q13868 293 aaKnown RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 FAM90A2PQ658T7 463 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 CAPN13Q6MZZ7 669 aaPredicted RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 ZC3HC1Q86WB0 502 aaKnown RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 NRMQ8IXM6 262 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 RXFP2Q8WXD0 754 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 ASB11Q8WXH4 323 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 NXPE2Q96DL1 559 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 SIK2Q9H0K1 926 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 PIGMQ9H3S5 423 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 ZDHHC6Q9H6R6 413 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 ZNF282Q9UDV7 671 aaPredicted RBP6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 EPHA6Q9UF33 1036 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 OR52A1Q9UKL2 312 aa6.95□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3DA0A087WVF3 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3IA0A087WXS9 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3EA0A087X179 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 A0A096LPK6 155 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 A0A1B0GV72 72 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3BA6NDS4 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3FA6NER0 549 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3LB9A6J9 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 ITGBL1O95965 494 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3HP0C7X1 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 RAP2AP10114 183 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 ARL2P36404 184 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 RFX3P48380 749 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 SRP9P49458 86 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 CRYBA4P53673 196 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 CRMP1Q14194 572 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 GLYR1Q49A26 553 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 LINC01620Q4KN68 170 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 SERTAD4-AS1Q5TG53 156 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3GQ6DHY5 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3CQ6IPX1 549 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 C19orf48Q6RUI8 117 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 LARP4Q71RC2 724 aaKnown RBP eCLIP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TRIM48Q8IWZ4 208 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TBC1D3Q8IZP1 549 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 MFSD9Q8NBP5 474 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 TMEM163Q8TC26 289 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 LGALS14Q8TCE9 139 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 UBASH3BQ8TF42 649 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 LRRC58Q96CX6 371 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 RBP7Q96R05 134 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 SCN3BQ9NY72 215 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 PRRC2BQ5JSZ5 2229 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 CLDN5O00501 218 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 MYL12BO14950 172 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 ZNF749O43361 778 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 LAMTOR5O43504 91 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 GAPDHP04406 335 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 HGFP14210 728 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 BMP7P18075 431 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 MYL12AP19105 171 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 IGFBP6P24592 240 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 HMGB2P26583 209 aaKnown RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 CCR7P32248 378 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 DLX5P56178 289 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 VLDLRP98155 873 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 PRPSAP1Q14558 356 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 IL13RA2Q14627 380 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 QPRTQ15274 297 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 INPP5JQ15735 1006 aaPredicted RBP6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 RFX4Q33E94 735 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 PXT1Q8NFP0 134 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 OR51D1Q8NGF3 324 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 HIST1H2AHQ96KK5 128 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 ZFP42Q96MM3 310 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 HIST1H2AJQ99878 128 aa6.94□□□□□ -1.3
SPTBN1-204ENST00000467371 KLF16Q9BXK1 252 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms