RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C10orf91Q5T1B1 145 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 TMEM205Q6UW68 189 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 TMEM106AQ96A25 262 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 ZNF107Q9UII5 783 aaPredicted RBP17.96■□□□□ 0.47
SDF4-205ENST00000465727 CARHSP1Q9Y2V2 147 aaKnown RBP17.96■□□□□ 0.47
SDF4-205ENST00000465727 NUP210LQ5VU65 1888 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 IFNA4P05014 189 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 MEOX2P50222 304 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 RPS4XP62701 263 aaKnown RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 RUNX2Q13950 521 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 OR51D1Q8NGF3 324 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 ZPLD1Q8TCW7 415 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 FGF13Q92913 245 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 SLC25A28Q96A46 364 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 LMAN2LQ9H0V9 348 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 SLCO5A1Q9H2Y9 848 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 KIR3DX1Q9H7L2 352 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 TRPV4Q9HBA0 871 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 CTSFQ9UBX1 484 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 OR1A2Q9Y585 309 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 RNF222A6NCQ9 220 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 LRRC72A6NJI9 287 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 OR4C45A6NMZ5 311 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 TTLL8A6PVC2 850 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 NKX2-2O95096 273 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 DLSTP36957 453 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 POU3F4P49335 361 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 GPR85P60893 370 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 HTRA4P83105 476 aaPredicted RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 YOD1Q5VVQ6 348 aaPredicted RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 ZNF614Q8N883 585 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 OR1J4Q8NGS1 313 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 RASD2Q96D21 266 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 ARSGQ96EG1 525 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 ADAD1Q96M93 576 aaKnown RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 ZNF75AQ96N20 296 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 MNTQ99583 582 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 ESRP2Q9H6T0 727 aaKnown RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 PHPT1Q9NRX4 125 aaPredicted RBP17.95■□□□□ 0.46
SDF4-205ENST00000465727 MBD2Q9UBB5 411 aa17.95■□□□□ 0.46
SDF4-205ENST00000465727 LOC100289279A0A1B0GTE1 492 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 TMEM72A0PK05 275 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 PRR19A6NJB7 356 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 RAD1O60671 282 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 RDH16O75452 317 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 FGF18O76093 207 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 RAB3DO95716 219 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 HLA-GP17693 338 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 CD34P28906 385 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 BDKRB2P30411 391 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 EFNB2P52799 333 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 RASGEF1BQ0VAM2 473 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 TSC22D1Q15714 1073 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 PRICKLE4Q2TBC4 344 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 DEFB134Q4QY38 66 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 TCEAL5Q5H9L2 206 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 C3orf33Q6P1S2 294 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 LEG1Q6P5S2 330 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 SLC39A5Q6ZMH5 540 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ETFBKMTQ8IXQ9 262 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZNF676Q8N7Q3 588 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 OR1S2Q8NGQ3 325 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 OR8S1Q8NH09 359 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 HOXB13Q92826 284 aaPredicted RBP17.94■□□□□ 0.46
SDF4-205ENST00000465727 MCHR2Q969V1 340 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 RSPRY1Q96DX4 576 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 PDCD10Q9BUL8 212 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 LYRM4Q9HD34 91 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZNF629Q9UEG4 869 aaPredicted RBP17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZNF230Q9UIE0 474 aaPredicted RBP17.94■□□□□ 0.46
SDF4-205ENST00000465727 HEBP2Q9Y5Z4 205 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 HCFC2Q9Y5Z7 792 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 A0A087WV48 116 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 FGF16O43320 207 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 LATO43561 262 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 SLC25A12O75746 678 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 CXCL14O95715 111 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 EMDP50402 254 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZNF234Q14588 700 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 MANEAQ5SRI9 462 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 TMEM88Q6PEY1 159 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 KIRREL2Q6UWL6 708 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZNF813Q6ZN06 617 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 NDUFAF7Q7L592 441 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 ZAR1Q86SH2 424 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 JAZF1Q86VZ6 243 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 OR2G2Q8NGZ5 317 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 OR8K3Q8NH51 312 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 PXYLP1Q8TE99 480 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 TM4SF19Q96DZ7 209 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 EDEM2Q9BV94 578 aa17.94■□□□□ 0.46
SDF4-205ENST00000465727 A0A087WUJ7 227 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 TBC1D3IA0A087WXS9 549 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 IMPA2O14732 288 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 P2RX6O15547 441 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 FKTNO75072 461 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 SNAPINO95295 136 aa17.93■□□□□ 0.46
SDF4-205ENST00000465727 APEHP13798 732 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms