RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 EEF1A1P5Q5VTE0 462 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 HLA-DQA1Q5Y7H0 255 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 PM20D2Q8IYS1 436 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 TSTD1Q8NFU3 115 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 OR2T35Q8NGX2 323 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 GPR148Q8TDV2 347 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 NXPE2Q96DL1 559 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF436Q9C0F3 470 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 CLEC4MQ9H2X3 399 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 EIF3KQ9UBQ5 218 aaKnown RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ELF5Q9UKW6 265 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ANKRD20A5PA0PJZ0 165 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 C11orf98E9PRG8 122 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 PHYHO14832 338 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ARPC1BO15143 372 aaKnown RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 NDUFB5O43674 189 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF254O75437 659 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 LDOC1O95751 146 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 PTHLHP12272 177 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF81P51508 661 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 RASGEF1BQ0VAM2 473 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 STPG1Q5TH74 334 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 NKAIN2Q5VXU1 208 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 SLC25A25Q6KCM7 469 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF227Q86WZ6 799 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 OR8H3Q8N146 312 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 FAM109AQ8N4B1 249 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 ADIPOR1Q96A54 375 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 OR1F2PQ96R84 312 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 NRSN2Q9GZP1 204 aa16.61■□□□□ 0.25
SYNE4-204ENST00000465425 METTL17Q9H7H0 456 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-204ENST00000465425 BRWD1Q9NSI6 2320 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 OR4C45A6NMZ5 311 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 H3BSH0 61 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 TAS2R20P59543 309 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 RPS15P62841 145 aaKnown RBP16.6■□□□□ 0.25
SYNE4-204ENST00000465425 DEFB133Q30KQ1 61 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 LRRTM1Q86UE6 522 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF680Q8NEM1 530 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.6■□□□□ 0.25
SYNE4-204ENST00000465425 METTL21AQ8WXB1 218 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 TBL1XR1Q9BZK7 514 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 NOX3Q9HBY0 568 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 CACNA1IQ9P0X4 2223 aa16.6■□□□□ 0.25
SYNE4-204ENST00000465425 A0A1B0GUH1 482 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF217O75362 1048 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TOXO94900 526 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 GPANK1O95872 356 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 IGKV3-11P04433 115 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 CENPAP49450 140 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ARL4DP49703 201 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ZP1P60852 638 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ZP2Q05996 745 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ELAVL1Q15717 326 aaKnown RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 SYT13Q7L8C5 426 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 OR51A4Q8NGJ6 313 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 ZNF721Q8TF20 911 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 SLC25A36Q96CQ1 311 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 RTN4RQ9BZR6 473 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 DHCR7Q9UBM7 475 aaKnown RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 CDV3Q9UKY7 258 aaKnown RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 EML5Q05BV3 1969 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TRAV8-7A0A075B6U6 113 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TRAV36DV7A0A075B6V5 113 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 A0A1W2PQ72 361 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 HSPB2A8KAH6 182 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 SLC22A5O76082 557 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 LCN1P31025 176 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 NR0B1P51843 470 aaKnown RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 DCAF7P61962 342 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TOMM34Q15785 309 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 HSPB2Q16082 182 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 FAAP20Q6NZ36 180 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 MARCH3Q86UD3 253 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 CEP76Q8TAP6 659 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TSEN15Q8WW01 171 aaKnown RBP16.59■□□□□ 0.25
SYNE4-204ENST00000465425 TTC9Q92623 222 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 CHRNA10Q9GZZ6 450 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 STEAP1Q9UHE8 339 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 KCNG2Q9UJ96 466 aa16.59■□□□□ 0.25
SYNE4-204ENST00000465425 IGHV1OR15-9A0A0B4J2B8 117 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 RHPN2P1A8MT19 583 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 CDC40O60508 579 aaKnown RBP eCLIP16.58■□□□□ 0.25
SYNE4-204ENST00000465425 DDAH2O95865 285 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 PLGP00747 810 aaPredicted RBP16.58■□□□□ 0.25
SYNE4-204ENST00000465425 PGCP20142 388 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 SSTR2P30874 369 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 DCTDP32321 178 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 P2RX3P56373 397 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 PLCXD2Q0VAA5 305 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 CLPPQ16740 277 aaPredicted RBP16.58■□□□□ 0.25
SYNE4-204ENST00000465425 LGALSLQ3ZCW2 172 aaPredicted RBP16.58■□□□□ 0.25
SYNE4-204ENST00000465425 OLFML2AQ68BL7 652 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 MAMDC2Q7Z304 686 aaPredicted RBP16.58■□□□□ 0.25
SYNE4-204ENST00000465425 OR10AC1Q8NH08 325 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 OTOSQ8NHW6 89 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.25
SYNE4-204ENST00000465425 ULBP3Q9BZM4 244 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms