RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 PDGFRLQ15198 375 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 EXT1Q16394 746 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TRIM16LQ309B1 348 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CHRFAM7AQ494W8 412 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 GPR33Q49SQ1 333 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 IQCCQ4KMZ1 466 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 GFI1BQ5VTD9 330 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TXNRD3NBQ6F5E7 133 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 UGT3A1Q6NUS8 523 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 DNAJC24Q6P3W2 148 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SCYL2Q6P3W7 929 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PET117Q6UWS5 81 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NPSR1Q6W5P4 371 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 IL17RELQ6ZVW7 336 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NOTCH2NLQ7Z3S9 236 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PIWIL3Q7Z3Z3 882 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PIGWQ7Z7B1 504 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CROCCP2Q86T23 111 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TRIM69Q86WT6 500 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CTAGE3PQ8IX95 158 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SIX6OS1Q8N1H7 587 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 OR7A2PQ8NGA2 310 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 OR52M1Q8NGK5 317 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 AENQ8WTP8 325 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 C2orf15Q8WU43 125 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ITLN2Q8WWU7 325 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RXFP2Q8WXD0 754 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NRGNQ92686 78 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 BSCL2Q96G97 398 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SMARCD1Q96GM5 515 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RILPQ96NA2 401 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ZIM3Q96PE6 472 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RBM4BQ9BQ04 359 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RBM4Q9BWF3 364 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 MRPS26Q9BYN8 205 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 OSBPL8Q9BZF1 889 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RIMS4Q9H426 269 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 IFT46Q9NQC8 304 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ZDHHC18Q9NUE0 388 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 DNAJC11Q9NVH1 559 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NINJ2Q9NZG7 142 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 AKAP7Q9P0M2 348 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SPASTQ9UBP0 616 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 EPHA6Q9UF33 1036 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 MRPS7Q9Y2R9 242 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 AUP1Q9Y679 476 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RNF215Q9Y6U7 377 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 HCFC1P51610 2035 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CCDC160A6NGH7 325 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SMIM23A6NLE4 172 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 LINC00587B1AMM8 73 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 M0QZK8 103 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CLDN5O00501 218 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF195O14628 629 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC31A2O15432 143 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 GMFGO60234 142 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 GLRA3O75311 464 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CDK2AP2O75956 126 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 IFNGP01579 166 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 MBP02144 154 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CRYGCP07315 174 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 FBP1P09467 338 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 COX4I1P13073 169 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF26P17031 533 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 ADRA2CP18825 462 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 IMPDH1P20839 514 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CD1BP29016 333 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CRABP1P29762 137 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 FDFT1P37268 417 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 COILP38432 576 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CAPGP40121 348 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 ACTR1BP42025 376 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CASP3P42574 277 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 GNPDA1P46926 289 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 ALDH3B2P48448 385 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC1A6P48664 564 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 TPMTP51580 245 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 LUMP51884 338 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 NDST2P52849 883 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 C21orf59P57076 290 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 PRPS1P60891 318 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 NCALDP61601 193 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 LIPEQ05469 1076 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC34A1Q06495 639 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 PDK2Q15119 407 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 CDK10Q15131 360 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 TMEM30BQ3MIR4 351 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC25A52Q3SY17 297 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 KCTD21Q4G0X4 260 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 GPAT3Q53EU6 434 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 FASTKD1Q53R41 847 aaKnown RBP4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 XKR6Q5GH73 641 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 TFDP3Q5H9I0 405 aa4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 OTUD3Q5T2D3 398 aaPredicted RBP4.28□□□□□ -1.72
CACNA1C-223ENST00000465278 SEL1L2Q5TEA6 688 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms