RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PPP1R3CQ9UQK1 317 aa10.98□□□□□ -0.65
C9orf3-211ENST00000463372 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
C9orf3-211ENST00000463372 DNALI1O14645 258 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-211ENST00000463372 PHYHO14832 338 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 PEX14O75381 377 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 OR4F21O95013 312 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 TNFSF4P23510 183 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 TACR3P29371 465 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 PGM1P36871 562 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 AQP5P55064 265 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 SPDYAQ5MJ70 313 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 KLC3Q6P597 504 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 EMBQ6PCB8 327 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 FAM120BQ96EK7 910 aaKnown RBP10.97□□□□□ -0.65
C9orf3-211ENST00000463372 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 SEMA6AQ9H2E6 1030 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 LRMDAQ9H2I8 198 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 FAF1Q9UNN5 650 aaPredicted RBP10.97□□□□□ -0.65
C9orf3-211ENST00000463372 SLC35A3Q9Y2D2 325 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 KCNE3Q9Y6H6 103 aa10.97□□□□□ -0.65
C9orf3-211ENST00000463372 C22orf46C9J442 243 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 TMEM178BH3BS89 294 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 PPP6CO00743 305 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 MFN2O95140 757 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 SNAP29O95721 258 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 PAHP00439 452 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 LHBP01229 141 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 KRT16P08779 473 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-211ENST00000463372 CRATP43155 626 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 GATA4P43694 442 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 MFSD13AQ14CX5 517 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 PPP1R7Q15435 360 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 WDR25Q64LD2 544 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-211ENST00000463372 ANKRD26P1Q6NSI1 321 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 RPS27LQ71UM5 84 aaKnown RBP10.96□□□□□ -0.65
C9orf3-211ENST00000463372 ZNF627Q7L945 461 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 SNX32Q86XE0 403 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 LRRC8AQ8IWT6 810 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 CENPLQ8N0S6 344 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-211ENST00000463372 FBXO36Q8NEA4 188 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 FAM71CQ8NEG0 241 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 OR1J2Q8NGS2 313 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 VANGL1Q8TAA9 524 aaPredicted RBP10.96□□□□□ -0.65
C9orf3-211ENST00000463372 C8orf46Q8TAG6 207 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 TFAP2CQ92754 450 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 SDF2Q99470 211 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 NPFFR1Q9GZQ6 430 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 C1orf198Q9H425 327 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 MSL2Q9HCI7 577 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 RAB18Q9NP72 206 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 B3GAT2Q9NPZ5 323 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 INPP5EQ9NRR6 644 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 SIRT5Q9NXA8 310 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 KCNE5Q9UJ90 142 aa10.96□□□□□ -0.65
C9orf3-211ENST00000463372 ALMS1Q8TCU4 4167 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 H0YHG0 523 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 STX16-NPEPL1H3BU86 382 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 STX16O14662 325 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 AKAP8O43823 692 aaKnown RBP10.95□□□□□ -0.66
C9orf3-211ENST00000463372 UGT2B17O75795 530 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF205O95201 554 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 PROCP04070 461 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 PATE4P0C8F1 98 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 HMOX2P30519 316 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 C1DQ13901 141 aaKnown RBP10.95□□□□□ -0.66
C9orf3-211ENST00000463372 CD276Q5ZPR3 534 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 KDM8Q8N371 416 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 ARFGAP2Q8N6H7 521 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 PNLDC1Q8NA58 520 aaKnown RBP10.95□□□□□ -0.66
C9orf3-211ENST00000463372 GRK7Q8WTQ7 553 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 NPRL2Q8WTW4 380 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 TMEM246Q9BRR3 403 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 DCTN5Q9BTE1 182 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 PCDHAC1Q9H158 963 aa10.95□□□□□ -0.66
C9orf3-211ENST00000463372 RAMP3O60896 148 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 PTHP01270 115 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 CXCR1P25024 350 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 MPV17P39210 176 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 PHYHD1Q5SRE7 291 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 SPATA46Q5T0L3 261 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 THEM4Q5T1C6 240 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 SATL1Q86VE3 508 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 VRK2Q86Y07 508 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 SCAIQ8N9R8 606 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 MAGEB18Q96M61 343 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 OR2M2Q96R28 347 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 ZNF382Q96SR6 550 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 FOXB1Q99853 325 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
C9orf3-211ENST00000463372 SIRPDQ9H106 197 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 TCF7L2Q9NQB0 619 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 TMCO1Q9UM00 188 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 POLR3HQ9Y535 204 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-211ENST00000463372 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
C9orf3-211ENST00000463372 H3BUX3 64 aa10.93□□□□□ -0.66
C9orf3-211ENST00000463372 BCAS1O75363 584 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-211ENST00000463372 STX11O75558 287 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms