RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 EEF1A1P5Q5VTE0 462 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 CPOQ8IVL8 374 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 RPRMLQ8N4K4 120 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 TMEM54Q969K7 222 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 LRR1Q96L50 414 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 IL4I1Q96RQ9 567 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 TM9SF2Q99805 663 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 Q9H521 79 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 RASSF1Q9NS23 344 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 IMPAD1Q9NX62 359 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 FOXD3Q9UJU5 478 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-202ENST00000463060 GPR52Q9Y2T5 361 aa12.72□□□□□ -0.37
COL6A1-202ENST00000463060 SMG1Q96Q15 3661 aaKnown RBP12.72□□□□□ -0.37
COL6A1-202ENST00000463060 FAM183AA6NL82 134 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 ARHGEF9O43307 516 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 MPZL2O60487 215 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 IFNGP01579 166 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 GLI4P10075 376 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 SLC2A5P22732 501 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 EDNRAP25101 427 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 AGTR1P30556 359 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 KIR2DL2P43627 348 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-202ENST00000463060 SELENOPP49908 381 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 SLC25A1P53007 311 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 IL5RAQ01344 420 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-202ENST00000463060 MED21Q13503 144 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 OR2A2Q6IF42 318 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 LEG1Q6P5S2 330 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 LRFN4Q6PJG9 635 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 B3GNT6Q6ZMB0 384 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.37
COL6A1-202ENST00000463060 HDDC2Q7Z4H3 204 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 BCDIN3DQ7Z5W3 292 aaKnown RBP12.71□□□□□ -0.37
COL6A1-202ENST00000463060 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 SDR9C7Q8NEX9 313 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 ZNRF4Q8WWF5 429 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 CNBD2Q96M20 576 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 DMRTA2Q96SC8 542 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 TTYH2Q9BSA4 534 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 ALG12Q9BV10 488 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 CLEC4AQ9UMR7 237 aa12.71□□□□□ -0.37
COL6A1-202ENST00000463060 PHF3Q92576 2039 aaKnown RBP12.71□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF726A6NNF4 738 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 H7C1C5 153 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 DCTN6O00399 190 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 XKRYO14609 159 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 ENTPD6O75354 484 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 IGHG1P01857 330 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 CRHP06850 196 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 STSP08842 583 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 LCN6P62502 163 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 FOXF2Q12947 444 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 CAMK2DQ13557 499 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 PHYHD1Q5SRE7 291 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 NIPAL3Q6P499 406 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
COL6A1-202ENST00000463060 P4HA3Q7Z4N8 544 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 ZBTB46Q86UZ6 589 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 OR6V1Q8N148 313 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 BBS1Q8NFJ9 593 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 CNIH3Q8TBE1 160 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF566Q969W8 418 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
COL6A1-202ENST00000463060 PLEKHA8Q96JA3 519 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF582Q96NG8 517 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-202ENST00000463060 LINC00470Q9BZP3 86 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 NUAK2Q9H093 628 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 MED20Q9H944 212 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 GLTPQ9NZD2 209 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
COL6A1-202ENST00000463060 NOSIPQ9Y314 301 aaKnown RBP12.7□□□□□ -0.38
COL6A1-202ENST00000463060 IGLV1-36A0A0B4J1U3 117 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 IGKV1D-43A0A0B4J1Z2 117 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 B8ZZF3 427 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 PRR23D1E9PI22 279 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-202ENST00000463060 E9PLN8 166 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 AKAP8O43823 692 aaKnown RBP12.69□□□□□ -0.38
COL6A1-202ENST00000463060 TNFSF13O75888 250 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 C1QL1O75973 258 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 CGAP01215 116 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 PRR23D2P0DMB1 279 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-202ENST00000463060 CLUP10909 449 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 ZNF3P17036 446 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 CA7P43166 264 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SMN1Q16637 294 aaKnown RBP12.69□□□□□ -0.38
COL6A1-202ENST00000463060 SOWAHCQ53LP3 525 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-202ENST00000463060 THEM4Q5T1C6 240 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 RIPPLY2Q5TAB7 128 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
COL6A1-202ENST00000463060 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms