RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CORINQ9Y5Q5 1042 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 SNX13Q9Y5W8 968 aa6.89□□□□□ -1.31
CDC42BPA-210ENST00000462553 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 IGHV4-61A0A0C4DH41 118 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 LOC102725191A0A1B0GVB3 256 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PLPP3O14495 311 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 FFAR1O14842 300 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PIP5K1CO60331 668 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 UPK3AO75631 287 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 DCTN3O75935 186 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 SERPINA1P01009 418 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 IFNA14P01570 189 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 ASAH2BP0C7U1 165 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 GTF2E2P29084 291 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 APOBEC3AP31941 199 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 NR4A2P43354 598 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 GZMKP49863 264 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 CLDN17P56750 224 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 TAS2R41P59536 307 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PUDPQ08623 228 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 GGTLC2Q14390 218 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 KRT72Q14CN4 511 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 MFSD13AQ14CX5 517 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PHYHD1Q5SRE7 291 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 TMEM225Q6GV28 225 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 FAM166AQ6J272 317 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 NIPAL3Q6P499 406 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 H1FNTQ75WM6 255 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 AAED1Q7RTV5 226 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 OFCC1Q8IZS5 231 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PGAM4Q8N0Y7 254 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 LRRC17Q8N6Y2 441 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 RNF148Q8N7C7 305 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 FAM86B1Q8N7N1 296 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 POMGNT2Q8NAT1 580 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 FAM156AQ8NDB6 213 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR5J2Q8NH18 312 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 TMEM255BQ8WV15 326 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 GEMIN6Q8WXD5 167 aaKnown RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 HPS1Q92902 700 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 BOD1Q96IK1 185 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 TPD52L3Q96J77 140 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 MPP4Q96JB8 637 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 HSH2DQ96JZ2 352 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 PRRC1Q96M27 445 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 ALKBH3Q96Q83 286 aaPredicted RBP6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 LRRC37BQ96QE4 947 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 OR2M2Q96R28 347 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 SLC19A3Q9BZV2 496 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 FKRPQ9H9S5 495 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 C20orf141Q9NUB4 165 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 EGFL7Q9UHF1 273 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 RIMS3Q9UJD0 308 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 KCNS2Q9ULS6 477 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 RCE1Q9Y256 329 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 AMDHD2Q9Y303 409 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 ATP23Q9Y6H3 246 aa6.88□□□□□ -1.31
CDC42BPA-210ENST00000462553 IGHV1-18A0A0C4DH31 117 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 NDUFS8O00217 210 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 NDUFAB1O14561 156 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF682O95780 498 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 CH25HO95992 272 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 MT-ATP6P00846 226 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 IGF2P01344 180 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 MT-ND1P03886 318 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 SEMG1P04279 462 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 TSPAN19P0C672 248 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 T-ENOLP0DO92 83 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 THRBP10828 461 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 HSD17B1P14061 328 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF43P17038 809 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 MPGP29372 298 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 RBM34P42696 430 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 YAP1P46937 504 aaKnown RBP6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 PDLIM4P50479 330 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 POU3F1Q03052 451 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZP4Q12836 540 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 IQCCQ4KMZ1 466 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 HIKESHIQ53FT3 197 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 IFI44LQ53G44 452 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 TTC33Q6PID6 262 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 DEPDC4Q8N2C3 294 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 TMEM239Q8WW34 195 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 FAM162AQ96A26 154 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 FBXO17Q96EF6 278 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ZNF837Q96EG3 531 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 TXNDC15Q96J42 360 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 C7orf34Q96L11 122 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 PIMREGQ9BSJ6 248 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ASPNQ9BXN1 380 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 LINC00470Q9BZP3 86 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 SEC61A2Q9H9S3 476 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 PARPBPQ9NWS1 579 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 MED29Q9NX70 200 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 TAS2R5Q9NYW4 299 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 ADA2Q9NZK5 511 aa6.87□□□□□ -1.31
CDC42BPA-210ENST00000462553 UPB1Q9UBR1 384 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms