RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ABCD4O14678 606 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 ACOT8O14734 319 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 SEC14L2O76054 403 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 WNT11O96014 354 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 PTAFRP25105 342 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 MAGEA2P43356 314 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 OMPP47874 163 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 LIMS1P48059 325 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 DAP3P51398 398 aaKnown RBP13.84□□□□□ -0.19
ERCC3-206ENST00000462306 ART1P52961 327 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 SMIM11AP58511 58 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 HIST3H3Q16695 136 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 ZNF672Q499Z4 452 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-206ENST00000462306 PGM2L1Q6PCE3 622 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 KLHL24Q6TFL4 600 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 C20orf204Q6ZNR8 217 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 ZNF611Q8N823 705 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 KBTBD8Q8NFY9 601 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 IGFBPL1Q8WX77 278 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 CCDC124Q96CT7 223 aaKnown RBP13.84□□□□□ -0.19
ERCC3-206ENST00000462306 FAM46AQ96IP4 442 aaKnown RBP13.84□□□□□ -0.19
ERCC3-206ENST00000462306 ZNF347Q96SE7 839 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 FOXC2Q99958 501 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 TMEM5Q9Y2B1 443 aa13.84□□□□□ -0.19
ERCC3-206ENST00000462306 SH3PXD2BA1X283 911 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF503-AS2A6NEH8 195 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 MCIDASD6RGH6 385 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 GYG2O15488 501 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 PTP4A3O75365 173 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 TRMUO75648 421 aaKnown RBP13.83□□□□□ -0.2
ERCC3-206ENST00000462306 GADD45GO95257 159 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 IGHG1P01857 330 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 ACADSP16219 412 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF26P17031 533 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-206ENST00000462306 UBE2NP61088 152 aaKnown RBP13.83□□□□□ -0.2
ERCC3-206ENST00000462306 TUBA1BP68363 451 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 TUBA4AP68366 448 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 SPIBQ01892 262 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 SPOCK1Q08629 439 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 BNIP1Q12981 228 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 DEFB113Q30KQ7 82 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 ZBED5Q49AG3 693 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 TUBA1AQ71U36 451 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 CXXC4Q9H2H0 198 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 CRNNQ9UBG3 495 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-206ENST00000462306 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 POFUT2Q9Y2G5 429 aa13.83□□□□□ -0.2
ERCC3-206ENST00000462306 CENPBD1B2RD01 187 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 DHHO43323 396 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 IGHMP01871 453 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 QDPRP09417 244 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 PAX7P23759 505 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 RRM2P31350 389 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 CTXN1P60606 82 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 RPL27P61353 136 aaKnown RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 TRAP1Q12931 704 aaKnown RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 TAF11Q15544 211 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF813Q6ZN06 617 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 HDDC2Q7Z4H3 204 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 IGFN1Q86VF2 1251 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 FAM169BQ8N8A8 192 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 SYT14Q8NB59 555 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 NOXO1Q8NFA2 376 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 HDAC2Q92769 488 aaKnown RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 RADILQ96JH8 1075 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 ALPK1Q96QP1 1244 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 GPA33Q99795 319 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 FOXB1Q99853 325 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 MAGIXQ9H6Y5 334 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 BEX4Q9NWD9 120 aaPredicted RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 B3GNT2Q9NY97 397 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF346Q9UL40 294 aaKnown RBP13.82□□□□□ -0.2
ERCC3-206ENST00000462306 SIGLEC7Q9Y286 467 aa13.82□□□□□ -0.2
ERCC3-206ENST00000462306 IGHV1-18A0A0C4DH31 117 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 IGLV1-44P01699 117 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 DANCRP0C864 163 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 B4GALT1P15291 398 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF133P52736 654 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-206ENST00000462306 HMGA2P52926 109 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 CLRN1P58418 232 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 MYBPC1Q00872 1141 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 TOP3AQ13472 1001 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-206ENST00000462306 C3orf36Q3SXR2 165 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 SPNS3Q6ZMD2 512 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 ZER1Q7Z7L7 766 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 CCDC36Q8IYA8 594 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 PIAS4Q8N2W9 510 aaPredicted RBP13.81□□□□□ -0.2
ERCC3-206ENST00000462306 ZNF519Q8TB69 540 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 POP5Q969H6 163 aaKnown RBP13.81□□□□□ -0.2
ERCC3-206ENST00000462306 PIGTQ969N2 578 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 FBXW5Q969U6 566 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 MCHR2Q969V1 340 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 SLC38A2Q96QD8 506 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 TSPAN32Q96QS1 320 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 KCNK17Q96T54 332 aa13.81□□□□□ -0.2
ERCC3-206ENST00000462306 CCL19Q99731 98 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms