RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 B3GAT2Q9NPZ5 323 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 ZNF226Q9NYT6 803 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 ING1Q9UK53 422 aaPredicted RBP9.49□□□□□ -0.89
RTF1-202ENST00000462276 BLOC1S6Q9UL45 172 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.49□□□□□ -0.89
RTF1-202ENST00000462276 EMC9Q9Y3B6 208 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 FKBP7Q9Y680 259 aa9.49□□□□□ -0.89
RTF1-202ENST00000462276 GCN1Q92616 2671 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 IRGMA1A4Y4 181 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 SLC22A23A1A5C7 686 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 SLC22A31A6NKX4 558 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 E9PLN8 166 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 PRODHO43272 600 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 PRKYO43930 277 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 TRMUO75648 421 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 SERPINI2O75830 405 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 IL18BPO95998 194 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CCDC159P0C7I6 412 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 GABRB1P18505 474 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CDKN2AP42771 156 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 GUCA1AP43080 201 aaPredicted RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 ZNF133P52736 654 aaPredicted RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 PER3P56645 1201 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CLRN1P58418 232 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CD47Q08722 323 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CRMP1Q14194 572 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 GUSBP1Q15486 140 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 HIST3H3Q16695 136 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 MESTQ5EB52 335 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 C6orf141Q5SZD1 244 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 AADACL4Q5VUY2 407 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 LEG1Q6P5S2 330 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 FAM214BQ7L5A3 538 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CXXC5Q7LFL8 322 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 ABHD12BQ7Z5M8 362 aaPredicted RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 CPOQ8IVL8 374 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 C20orf196Q8IYI0 205 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 SLC37A3Q8NCC5 494 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 HDAC2Q92769 488 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 PTP4A1Q93096 173 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 RASD2Q96D21 266 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 CNBD2Q96M20 576 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 ZNF385AQ96PM9 386 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 OR2M2Q96R28 347 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 NR1H4Q96RI1 486 aaPredicted RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 IL4I1Q96RQ9 567 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 NMNAT3Q96T66 252 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 VKORC1Q9BQB6 163 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 LINC00470Q9BZP3 86 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 NMNAT2Q9BZQ4 307 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 PLCXD1Q9NUJ7 323 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 ASB6Q9NWX5 421 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 MED29Q9NX70 200 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 SCN3BQ9NY72 215 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 HAO2Q9NYQ3 351 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 WARS2Q9UGM6 360 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 RNF6Q9Y252 685 aa9.48□□□□□ -0.89
RTF1-202ENST00000462276 RPL36Q9Y3U8 105 aaKnown RBP9.48□□□□□ -0.89
RTF1-202ENST00000462276 SETXQ7Z333 2677 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 OR6C68A6NDL8 312 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 HSPB2A8KAH6 182 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 KDM4EB2RXH2 506 aaPredicted RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 KHDRBS3O75525 346 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 CLIC3O95833 236 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 STSP08842 583 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 PGA4P0DJD7 388 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 PGA3P0DJD8 388 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 KLK2P20151 261 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 HTR1FP30939 366 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 CEACAM8P31997 349 aaPredicted RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 CSNK1A1P48729 337 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 MLLT10P55197 1068 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 GLO1Q04760 184 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 POU4F2Q12837 409 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 HSPB2Q16082 182 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 RBM48Q5RL73 367 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 LCN1P1Q5VSP4 162 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 PLBD1Q6P4A8 553 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 RPTNQ6XPR3 784 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 MEPCEQ7L2J0 689 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 ZBTB46Q86UZ6 589 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 TUSC5Q8IXB3 177 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 ZNF100Q8IYN0 542 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 TMEM123Q8N131 208 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 NOXO1Q8NFA2 376 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 OR6K3Q8NGY3 331 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 OR6N1Q8NGY5 312 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 TMEM54Q969K7 222 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 APH1AQ96BI3 265 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 NMD3Q96D46 503 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 MYCBPQ99417 103 aaPredicted RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 TTYH2Q9BSA4 534 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 SFXN3Q9BWM7 321 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 RACGAP1Q9H0H5 632 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 HINT3Q9NQE9 182 aaKnown RBP9.47□□□□□ -0.89
RTF1-202ENST00000462276 RASSF1Q9NS23 344 aa9.47□□□□□ -0.89
RTF1-202ENST00000462276 MRPS18AQ9NVS2 196 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms