RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 NDUFS8O00217 210 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 IFNA14P01570 189 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 ZNF14P17017 642 aaPredicted RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 TNFRSF1BP20333 461 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 NR4A1P22736 598 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 SNTB2Q13425 540 aaKnown RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 DAG1Q14118 895 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 C6orf52Q5T4I8 152 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 LRFN4Q6PJG9 635 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 ZNF566Q969W8 418 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 SLC25A44Q96H78 314 aaPredicted RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 MS4A3Q96HJ5 214 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 MDFIQ99750 246 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 POLR2J2Q9GZM3 115 aaKnown RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 RAB1BQ9H0U4 201 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 POLR2J3Q9H1A7 115 aaKnown RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 MYOZ1Q9NP98 299 aaPredicted RBP16.38■□□□□ 0.21
VARS-220ENST00000461874 GID8Q9NWU2 228 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 COL6A5A8TX70 2615 aa16.38■□□□□ 0.21
VARS-220ENST00000461874 RTTNQ86VV8 2226 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 LOC390937A0A1W2PQ73 354 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 OR5F1O95221 314 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 MT-ND1P03886 318 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 UMPSP11172 480 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 ZNF35P13682 527 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
VARS-220ENST00000461874 NR4A2P43354 598 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 GIPRP48546 466 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 TAS2R41P59536 307 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 RAB1AP62820 205 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 GUCY1A3Q02108 690 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 KRT80Q6KB66 452 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 DEF8Q6ZN54 512 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 PIWIL3Q7Z3Z3 882 aaKnown RBP16.37■□□□□ 0.21
VARS-220ENST00000461874 SPATA21Q7Z572 469 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 NANOGNBQ7Z5D8 188 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 NKAIN4Q8IVV8 208 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 SVOPLQ8N434 492 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 FOXN4Q96NZ1 517 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 PIMREGQ9BSJ6 248 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 CCDC134Q9H6E4 229 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 RIMS3Q9UJD0 308 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
VARS-220ENST00000461874 FAM220BPB1ANY3 271 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 BLOC1S5-TXNDC5H3BN57 136 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 SLC22A2O15244 555 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 SHOX2O60902 331 aaPredicted RBP16.36■□□□□ 0.21
VARS-220ENST00000461874 UBL3O95164 117 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 BCL10O95999 233 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 PGA4P0DJD7 388 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 PGA3P0DJD8 388 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 FUT1P19526 365 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 OR1E2P47887 323 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 PTDSS1P48651 473 aaKnown RBP16.36■□□□□ 0.21
VARS-220ENST00000461874 UGT2B15P54855 530 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 LSM11P83369 360 aaKnown RBP eCLIP16.36■□□□□ 0.21
VARS-220ENST00000461874 PIN1Q13526 163 aaPredicted RBP16.36■□□□□ 0.21
VARS-220ENST00000461874 MELKQ14680 651 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 CARTPTQ16568 116 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 CYBRD1Q53TN4 286 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 CYB5R2Q6BCY4 276 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 PFN4Q8NHR9 129 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 TMEM255BQ8WV15 326 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 CMAHPQ9Y471 501 aa16.36■□□□□ 0.21
VARS-220ENST00000461874 DHHO43323 396 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 OR7A10O76100 309 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 RAB36O95755 333 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 IGF2P01344 180 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 IGHV4-31P0DP07 118 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 KDELR2P33947 212 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 RPL18Q07020 188 aaKnown RBP16.35■□□□□ 0.21
VARS-220ENST00000461874 GGTLC2Q14390 218 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 ZCCHC24Q8N2G6 241 aaKnown RBP16.35■□□□□ 0.21
VARS-220ENST00000461874 SLC22A24Q8N4F4 322 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 OR2T12Q8NG77 320 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 FGFBP3Q8TAT2 258 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 TMEM239Q8WW34 195 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 NEU4Q8WWR8 484 aaPredicted RBP16.35■□□□□ 0.21
VARS-220ENST00000461874 SGTBQ96EQ0 304 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 C20orf141Q9NUB4 165 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 TMEM38BQ9NVV0 291 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 ARMCX1Q9P291 453 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 FBXL3Q9UKT7 428 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 SPEF1Q9Y4P9 236 aa16.35■□□□□ 0.21
VARS-220ENST00000461874 A0A1W2PRG6 482 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 SH3PXD2BA1X283 911 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 ENTPD5O75356 428 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 IGHG1P01857 330 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 F13BP05160 661 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 ERCC1P07992 297 aaPredicted RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 IGFBP1P08833 259 aaPredicted RBP16.34■□□□□ 0.21
VARS-220ENST00000461874 QDPRP09417 244 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 PATE4P0C8F1 98 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 OR8G3PP0DMU2 310 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 THRBP10828 461 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 GLRXP35754 106 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 EVX1P49640 407 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 RUNX1T1Q06455 604 aa16.34■□□□□ 0.21
VARS-220ENST00000461874 RAB39AQ14964 217 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms