RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 H3BSA7 217 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 PPIHO43447 177 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 HPRP00739 348 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 PTHP01270 115 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 IGHV2-5P01817 119 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 MT-ND5P03915 603 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 ADH4P08319 380 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 ARAFP10398 606 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 CD79AP11912 226 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 PPIBP23284 216 aaKnown RBP12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 EPHA3P29320 983 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 CRYBB2P43320 205 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 VSNL1P62760 191 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 MOGQ16653 247 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 MS4A18Q3C1V0 323 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 LRIF1Q5T3J3 769 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 WDR93Q6P2C0 686 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 KRT73Q86Y46 540 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 C1orf174Q8IYL3 243 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 OR6X1Q8NH79 312 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF519Q8TB69 540 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 NANPQ8TBE9 248 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 BCL2L14Q9BZR8 327 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 THAP1Q9NVV9 213 aa12.43□□□□□ -0.42
DNMT3A-207ENST00000461228 CLDN25C9JDP6 229 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 RGS16O15492 202 aaPredicted RBP12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 ICMTO60725 284 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 OR8G3PP0DMU2 310 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 BGNP21810 368 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 COL8A2P25067 703 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 CSNK1A1P48729 337 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 NME5P56597 212 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 FOXL1Q12952 345 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 NKPD1Q17RQ9 610 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 KRT71Q3SY84 523 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 CROCCP2Q86T23 111 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 CARM1Q86X55 608 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 SYT14Q8NB59 555 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 OR6N1Q8NGY5 312 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 GTF2H4Q92759 462 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 TMEM54Q969K7 222 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 SEPHS2Q99611 448 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 TMEM38AQ9H6F2 299 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 HINT3Q9NQE9 182 aaKnown RBP12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 MED29Q9NX70 200 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 TREM2Q9NZC2 230 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 SELENONQ9NZV5 590 aa12.42□□□□□ -0.42
DNMT3A-207ENST00000461228 IGHV1-69-2A0A0G2JMI3 117 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 C5orf58C9J3I9 102 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 PLPP3O14495 311 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 WNT9BO14905 357 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 MPZL1O95297 269 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 HLA-DOBP13765 273 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SEC24CP53992 1094 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC18A1P54219 525 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 OCLNQ16625 522 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 C6orf10Q5SRN2 563 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 REEP3Q6NUK4 255 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 FAHD2BQ6P2I3 314 aaPredicted RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF613Q6PF04 617 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 HDDC2Q7Z4H3 204 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 LSRQ86X29 649 aaPredicted RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 BPIFB2Q8N4F0 458 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC22A24Q8N4F4 322 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC30A7Q8NEW0 376 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 OR5J2Q8NH18 312 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 FAHD2AQ96GK7 314 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SLC19A3Q9BZV2 496 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 PAIP1Q9H074 479 aaKnown RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 SLCO1B3Q9NPD5 702 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 PNPOQ9NVS9 261 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 TMEM38BQ9NVV0 291 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 GLTPQ9NZD2 209 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 CORO2BQ9UQ03 480 aa12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 POLR3KQ9Y2Y1 108 aaPredicted RBP12.41□□□□□ -0.42
DNMT3A-207ENST00000461228 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 WDR91A4D1P6 747 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF726A6NNF4 738 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 CLIC1O00299 241 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 CHP2O43745 196 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 BCL10O95999 233 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 IGHV3-13P01766 116 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 VIMP08670 466 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 HKR1P10072 659 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 NAT2P11245 290 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 RAD52P43351 418 aa12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 POLR2JP52435 117 aaKnown RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 ZNF133P52736 654 aaPredicted RBP12.4□□□□□ -0.42
DNMT3A-207ENST00000461228 RGS8P57771 180 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms